RNA–Protein interactions for RNA: ENST00000560239.1

AC048382.2-201, humanhuman

TSL 2 BASIC

Gene AC048382.2, Length 492 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048382.2-201ENST00000560239 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
AC048382.2-201ENST00000560239 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
AC048382.2-201ENST00000560239 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
AC048382.2-201ENST00000560239 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
AC048382.2-201ENST00000560239 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
AC048382.2-201ENST00000560239 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
AC048382.2-201ENST00000560239 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
AC048382.2-201ENST00000560239 ABCC9O60706 1549 aa13.69□□□□□ -0.22
AC048382.2-201ENST00000560239 FOXD1Q16676 465 aa13.52□□□□□ -0.25
AC048382.2-201ENST00000560239 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.32
AC048382.2-201ENST00000560239 ADRA2BP18089 450 aa13.07□□□□□ -0.32
AC048382.2-201ENST00000560239 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
AC048382.2-201ENST00000560239 NACADO15069 1562 aa12.98□□□□□ -0.33
AC048382.2-201ENST00000560239 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
AC048382.2-201ENST00000560239 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
AC048382.2-201ENST00000560239 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
AC048382.2-201ENST00000560239 UNC13AQ9UPW8 1703 aa12.77□□□□□ -0.36
AC048382.2-201ENST00000560239 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
AC048382.2-201ENST00000560239 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
AC048382.2-201ENST00000560239 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
AC048382.2-201ENST00000560239 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
AC048382.2-201ENST00000560239 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
AC048382.2-201ENST00000560239 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
AC048382.2-201ENST00000560239 MSH5O43196 834 aa12.48□□□□□ -0.41
AC048382.2-201ENST00000560239 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
AC048382.2-201ENST00000560239 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
AC048382.2-201ENST00000560239 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
AC048382.2-201ENST00000560239 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
AC048382.2-201ENST00000560239 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
AC048382.2-201ENST00000560239 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
AC048382.2-201ENST00000560239 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
AC048382.2-201ENST00000560239 CUX2O14529 1486 aa11.97□□□□□ -0.49
AC048382.2-201ENST00000560239 KCNA4P22459 653 aa11.96□□□□□ -0.49
AC048382.2-201ENST00000560239 NCAPD3P42695 1498 aa11.95□□□□□ -0.5
AC048382.2-201ENST00000560239 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
AC048382.2-201ENST00000560239 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
AC048382.2-201ENST00000560239 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
AC048382.2-201ENST00000560239 HMGXB3Q12766 1538 aa11.88□□□□□ -0.51
AC048382.2-201ENST00000560239 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
AC048382.2-201ENST00000560239 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
AC048382.2-201ENST00000560239 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
AC048382.2-201ENST00000560239 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
AC048382.2-201ENST00000560239 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
AC048382.2-201ENST00000560239 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
AC048382.2-201ENST00000560239 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
AC048382.2-201ENST00000560239 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
AC048382.2-201ENST00000560239 NESP48681 1621 aa11.71□□□□□ -0.53
AC048382.2-201ENST00000560239 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
AC048382.2-201ENST00000560239 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
AC048382.2-201ENST00000560239 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
AC048382.2-201ENST00000560239 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
AC048382.2-201ENST00000560239 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
AC048382.2-201ENST00000560239 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
AC048382.2-201ENST00000560239 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
AC048382.2-201ENST00000560239 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
AC048382.2-201ENST00000560239 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
AC048382.2-201ENST00000560239 WDR62O43379 1518 aa11.53□□□□□ -0.56
AC048382.2-201ENST00000560239 WIZO95785 1651 aa11.47□□□□□ -0.57
AC048382.2-201ENST00000560239 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
AC048382.2-201ENST00000560239 HOXD11P31277 338 aaPredicted RBP11.45□□□□□ -0.58
AC048382.2-201ENST00000560239 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
AC048382.2-201ENST00000560239 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
AC048382.2-201ENST00000560239 CFTRP13569 1480 aa11.41□□□□□ -0.58
AC048382.2-201ENST00000560239 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
AC048382.2-201ENST00000560239 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
AC048382.2-201ENST00000560239 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
AC048382.2-201ENST00000560239 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
AC048382.2-201ENST00000560239 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
AC048382.2-201ENST00000560239 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
AC048382.2-201ENST00000560239 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
AC048382.2-201ENST00000560239 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
AC048382.2-201ENST00000560239 RIMBP3CA6NJZ7 1639 aa11.21□□□□□ -0.61
AC048382.2-201ENST00000560239 RIMBP3BA6NNM3 1639 aa11.21□□□□□ -0.61
AC048382.2-201ENST00000560239 RIMBP3Q9UFD9 1639 aa11.21□□□□□ -0.61
AC048382.2-201ENST00000560239 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
AC048382.2-201ENST00000560239 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
AC048382.2-201ENST00000560239 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
AC048382.2-201ENST00000560239 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
AC048382.2-201ENST00000560239 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
AC048382.2-201ENST00000560239 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
AC048382.2-201ENST00000560239 ARHGEF11O15085 1522 aa11.16□□□□□ -0.62
AC048382.2-201ENST00000560239 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
AC048382.2-201ENST00000560239 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
AC048382.2-201ENST00000560239 TARBP1Q13395 1621 aaKnown RBP11.11□□□□□ -0.63
AC048382.2-201ENST00000560239 CHD1O14646 1710 aa11.11□□□□□ -0.63
AC048382.2-201ENST00000560239 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
AC048382.2-201ENST00000560239 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
AC048382.2-201ENST00000560239 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.64
AC048382.2-201ENST00000560239 CYB5RLQ6IPT4 315 aa11.03□□□□□ -0.64
AC048382.2-201ENST00000560239 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
AC048382.2-201ENST00000560239 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
AC048382.2-201ENST00000560239 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
AC048382.2-201ENST00000560239 SOGA1O94964 1423 aa11□□□□□ -0.65
AC048382.2-201ENST00000560239 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
AC048382.2-201ENST00000560239 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
AC048382.2-201ENST00000560239 ZBTB22O15209 634 aa10.98□□□□□ -0.65
AC048382.2-201ENST00000560239 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
AC048382.2-201ENST00000560239 FBLN2P98095 1184 aa10.98□□□□□ -0.65
AC048382.2-201ENST00000560239 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
AC048382.2-201ENST00000560239 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms