RNA–Protein interactions for RNA: ENST00000559814.5

APBA2-210, Transcript of amyloid beta precursor protein binding family A member 2, humanhuman

TSL 1 (best)

Gene APBA2, Length 2,555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA2-210ENST00000559814 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
APBA2-210ENST00000559814 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
APBA2-210ENST00000559814 ABCC9O60706 1549 aa33.35■■■□□ 2.93
APBA2-210ENST00000559814 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
APBA2-210ENST00000559814 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
APBA2-210ENST00000559814 HRCP23327 699 aa32.31■■■□□ 2.76
APBA2-210ENST00000559814 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
APBA2-210ENST00000559814 NACADO15069 1562 aa32.14■■■□□ 2.74
APBA2-210ENST00000559814 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
APBA2-210ENST00000559814 PCGF6Q9BYE7 350 aa31.96■■■□□ 2.71
APBA2-210ENST00000559814 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
APBA2-210ENST00000559814 CHIC1Q5VXU3 224 aa31.88■■■□□ 2.69
APBA2-210ENST00000559814 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
APBA2-210ENST00000559814 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
APBA2-210ENST00000559814 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
APBA2-210ENST00000559814 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
APBA2-210ENST00000559814 LOC105371045A0A1W2PR82 267 aa31.27■■■□□ 2.6
APBA2-210ENST00000559814 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
APBA2-210ENST00000559814 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
APBA2-210ENST00000559814 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
APBA2-210ENST00000559814 TRIM26Q12899 539 aaPredicted RBP30.83■■■□□ 2.53
APBA2-210ENST00000559814 DNAJC5BQ9UF47 199 aa30.75■■■□□ 2.51
APBA2-210ENST00000559814 SCAF1Q9H7N4 1312 aaKnown RBP30.51■■■□□ 2.48
APBA2-210ENST00000559814 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
APBA2-210ENST00000559814 PELP1Q8IZL8 1130 aaKnown RBP30.34■■■□□ 2.45
APBA2-210ENST00000559814 ZEB1P37275 1124 aaPredicted RBP30.3■■■□□ 2.44
APBA2-210ENST00000559814 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
APBA2-210ENST00000559814 EHMT2Q96KQ7 1210 aa30.25■■■□□ 2.43
APBA2-210ENST00000559814 FAM9AQ8IZU1 332 aaPredicted RBP30.23■■■□□ 2.43
APBA2-210ENST00000559814 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
APBA2-210ENST00000559814 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
APBA2-210ENST00000559814 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
APBA2-210ENST00000559814 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
APBA2-210ENST00000559814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.77■■■□□ 2.36
APBA2-210ENST00000559814 ACIN1Q9UKV3 1341 aaKnown RBP29.74■■■□□ 2.35
APBA2-210ENST00000559814 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
APBA2-210ENST00000559814 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
APBA2-210ENST00000559814 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
APBA2-210ENST00000559814 CCER1Q8TC90 406 aaPredicted RBP29.58■■■□□ 2.33
APBA2-210ENST00000559814 GTF3C3Q9Y5Q9 886 aa29.57■■■□□ 2.32
APBA2-210ENST00000559814 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
APBA2-210ENST00000559814 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
APBA2-210ENST00000559814 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
APBA2-210ENST00000559814 PEG3Q9GZU2 1588 aa29.46■■■□□ 2.31
APBA2-210ENST00000559814 DIEXFQ68CQ4 756 aaKnown RBP29.44■■■□□ 2.3
APBA2-210ENST00000559814 TTBK1Q5TCY1 1321 aaPredicted RBP29.43■■■□□ 2.3
APBA2-210ENST00000559814 CENPBP07199 599 aaPredicted RBP29.27■■■□□ 2.28
APBA2-210ENST00000559814 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
APBA2-210ENST00000559814 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
APBA2-210ENST00000559814 YTHDC1Q96MU7 727 aaKnown RBP29.11■■■□□ 2.25
APBA2-210ENST00000559814 WIZO95785 1651 aa29.01■■■□□ 2.23
APBA2-210ENST00000559814 MYT1Q01538 1121 aa28.91■■■□□ 2.22
APBA2-210ENST00000559814 ZNF316A6NFI3 1004 aaPredicted RBP28.91■■■□□ 2.22
APBA2-210ENST00000559814 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
APBA2-210ENST00000559814 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
APBA2-210ENST00000559814 MIER1Q8N108 512 aa28.81■■■□□ 2.2
APBA2-210ENST00000559814 CUX2O14529 1486 aa28.81■■■□□ 2.2
APBA2-210ENST00000559814 CEP162Q5TB80 1403 aa28.81■■■□□ 2.2
APBA2-210ENST00000559814 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
APBA2-210ENST00000559814 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
APBA2-210ENST00000559814 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.25e-6■■■■■ 29.2
APBA2-210ENST00000559814 NESP48681 1621 aa28.76■■■□□ 2.19
APBA2-210ENST00000559814 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
APBA2-210ENST00000559814 SOGA1O94964 1423 aa28.68■■■□□ 2.18
APBA2-210ENST00000559814 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
APBA2-210ENST00000559814 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
APBA2-210ENST00000559814 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
APBA2-210ENST00000559814 UBTFP17480 764 aaKnown RBP28.59■■■□□ 2.17
APBA2-210ENST00000559814 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
APBA2-210ENST00000559814 THOC2Q8NI27 1593 aaKnown RBP28.56■■■□□ 2.16
APBA2-210ENST00000559814 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
APBA2-210ENST00000559814 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
APBA2-210ENST00000559814 CFTRP13569 1480 aa28.48■■■□□ 2.15
APBA2-210ENST00000559814 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
APBA2-210ENST00000559814 MRC2Q9UBG0 1479 aa28.38■■■□□ 2.13
APBA2-210ENST00000559814 PRDM2Q13029 1718 aa28.34■■■□□ 2.13
APBA2-210ENST00000559814 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
APBA2-210ENST00000559814 WDR62O43379 1518 aa28.32■■■□□ 2.12
APBA2-210ENST00000559814 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
APBA2-210ENST00000559814 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
APBA2-210ENST00000559814 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.11
APBA2-210ENST00000559814 SUPT16HQ9Y5B9 1047 aaKnown RBP28.19■■■□□ 2.1
APBA2-210ENST00000559814 EEA1Q15075 1411 aa28.15■■■□□ 2.1
APBA2-210ENST00000559814 DNAJC5Q9H3Z4 198 aa28.07■■■□□ 2.08
APBA2-210ENST00000559814 CLIP1P30622 1438 aa28.06■■■□□ 2.08
APBA2-210ENST00000559814 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
APBA2-210ENST00000559814 TSHZ2Q9NRE2 1034 aa27.99■■■□□ 2.07
APBA2-210ENST00000559814 APLP2Q06481 763 aa27.97■■■□□ 2.07
APBA2-210ENST00000559814 VPS8Q8N3P4 1428 aa27.96■■■□□ 2.07
APBA2-210ENST00000559814 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
APBA2-210ENST00000559814 KCNH8Q96L42 1107 aa27.88■■■□□ 2.05
APBA2-210ENST00000559814 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
APBA2-210ENST00000559814 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
APBA2-210ENST00000559814 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
APBA2-210ENST00000559814 TOPBP1Q92547 1522 aa27.84■■■□□ 2.05
APBA2-210ENST00000559814 KIF21BO75037 1637 aa27.84■■■□□ 2.05
APBA2-210ENST00000559814 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
APBA2-210ENST00000559814 BCANQ96GW7 911 aa27.8■■■□□ 2.04
APBA2-210ENST00000559814 ANP32EQ9BTT0 268 aa27.79■■■□□ 2.04
APBA2-210ENST00000559814 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms