RNA–Protein interactions for RNA: ENST00000559537.1

MESD-203, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 4

Gene MESD, Length 539 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-203ENST00000559537 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
MESD-203ENST00000559537 ABCC9O60706 1549 aa24.76■■□□□ 1.55
MESD-203ENST00000559537 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
MESD-203ENST00000559537 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
MESD-203ENST00000559537 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
MESD-203ENST00000559537 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.262e-7■■■□□ 18
MESD-203ENST00000559537 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
MESD-203ENST00000559537 NACADO15069 1562 aa22.66■■□□□ 1.22
MESD-203ENST00000559537 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
MESD-203ENST00000559537 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
MESD-203ENST00000559537 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
MESD-203ENST00000559537 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
MESD-203ENST00000559537 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
MESD-203ENST00000559537 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.11
MESD-203ENST00000559537 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
MESD-203ENST00000559537 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
MESD-203ENST00000559537 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
MESD-203ENST00000559537 CUX2O14529 1486 aa21.58■■□□□ 1.04
MESD-203ENST00000559537 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
MESD-203ENST00000559537 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
MESD-203ENST00000559537 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
MESD-203ENST00000559537 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
MESD-203ENST00000559537 NESP48681 1621 aa20.98■□□□□ 0.95
MESD-203ENST00000559537 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
MESD-203ENST00000559537 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
MESD-203ENST00000559537 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
MESD-203ENST00000559537 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
MESD-203ENST00000559537 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
MESD-203ENST00000559537 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
MESD-203ENST00000559537 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
MESD-203ENST00000559537 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
MESD-203ENST00000559537 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
MESD-203ENST00000559537 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
MESD-203ENST00000559537 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
MESD-203ENST00000559537 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
MESD-203ENST00000559537 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
MESD-203ENST00000559537 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
MESD-203ENST00000559537 WDR62O43379 1518 aa20.37■□□□□ 0.85
MESD-203ENST00000559537 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
MESD-203ENST00000559537 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
MESD-203ENST00000559537 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
MESD-203ENST00000559537 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
MESD-203ENST00000559537 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
MESD-203ENST00000559537 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
MESD-203ENST00000559537 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
MESD-203ENST00000559537 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
MESD-203ENST00000559537 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
MESD-203ENST00000559537 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
MESD-203ENST00000559537 WIZO95785 1651 aa19.87■□□□□ 0.77
MESD-203ENST00000559537 FBLN2P98095 1184 aa19.84■□□□□ 0.77
MESD-203ENST00000559537 CFTRP13569 1480 aa19.84■□□□□ 0.77
MESD-203ENST00000559537 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
MESD-203ENST00000559537 CHD1O14646 1710 aa19.78■□□□□ 0.76
MESD-203ENST00000559537 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
MESD-203ENST00000559537 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
MESD-203ENST00000559537 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
MESD-203ENST00000559537 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
MESD-203ENST00000559537 PRDM2Q13029 1718 aa19.61■□□□□ 0.73
MESD-203ENST00000559537 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
MESD-203ENST00000559537 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
MESD-203ENST00000559537 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
MESD-203ENST00000559537 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
MESD-203ENST00000559537 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
MESD-203ENST00000559537 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
MESD-203ENST00000559537 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
MESD-203ENST00000559537 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
MESD-203ENST00000559537 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
MESD-203ENST00000559537 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
MESD-203ENST00000559537 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
MESD-203ENST00000559537 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
MESD-203ENST00000559537 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
MESD-203ENST00000559537 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
MESD-203ENST00000559537 SOGA1O94964 1423 aa19.29■□□□□ 0.68
MESD-203ENST00000559537 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
MESD-203ENST00000559537 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
MESD-203ENST00000559537 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
MESD-203ENST00000559537 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
MESD-203ENST00000559537 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.65
MESD-203ENST00000559537 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
MESD-203ENST00000559537 FAM69CQ0P6D2 419 aa19.07■□□□□ 0.64
MESD-203ENST00000559537 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
MESD-203ENST00000559537 KDM6BO15054 1643 aa19.01■□□□□ 0.63
MESD-203ENST00000559537 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
MESD-203ENST00000559537 CUX1P39880 1505 aa18.95■□□□□ 0.62
MESD-203ENST00000559537 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
MESD-203ENST00000559537 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
MESD-203ENST00000559537 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
MESD-203ENST00000559537 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
MESD-203ENST00000559537 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
MESD-203ENST00000559537 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
MESD-203ENST00000559537 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
MESD-203ENST00000559537 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
MESD-203ENST00000559537 NUP160Q12769 1436 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms