RNA–Protein interactions for RNA: ENST00000559436.2

ZHX3-216, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 2

Gene ZHX3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-216ENST00000559436 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.28
ZHX3-216ENST00000559436 ABCC9O60706 1549 aa21.49■■□□□ 1.03
ZHX3-216ENST00000559436 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
ZHX3-216ENST00000559436 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
ZHX3-216ENST00000559436 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
ZHX3-216ENST00000559436 NACADO15069 1562 aa19.91■□□□□ 0.78
ZHX3-216ENST00000559436 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
ZHX3-216ENST00000559436 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
ZHX3-216ENST00000559436 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
ZHX3-216ENST00000559436 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
ZHX3-216ENST00000559436 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
ZHX3-216ENST00000559436 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
ZHX3-216ENST00000559436 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
ZHX3-216ENST00000559436 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
ZHX3-216ENST00000559436 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
ZHX3-216ENST00000559436 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
ZHX3-216ENST00000559436 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
ZHX3-216ENST00000559436 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
ZHX3-216ENST00000559436 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
ZHX3-216ENST00000559436 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
ZHX3-216ENST00000559436 CUX2O14529 1486 aa18.69■□□□□ 0.58
ZHX3-216ENST00000559436 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
ZHX3-216ENST00000559436 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
ZHX3-216ENST00000559436 NESP48681 1621 aa18.31■□□□□ 0.52
ZHX3-216ENST00000559436 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
ZHX3-216ENST00000559436 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
ZHX3-216ENST00000559436 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
ZHX3-216ENST00000559436 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
ZHX3-216ENST00000559436 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
ZHX3-216ENST00000559436 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
ZHX3-216ENST00000559436 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
ZHX3-216ENST00000559436 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
ZHX3-216ENST00000559436 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
ZHX3-216ENST00000559436 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
ZHX3-216ENST00000559436 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
ZHX3-216ENST00000559436 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
ZHX3-216ENST00000559436 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
ZHX3-216ENST00000559436 WDR62O43379 1518 aa17.87■□□□□ 0.45
ZHX3-216ENST00000559436 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
ZHX3-216ENST00000559436 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
ZHX3-216ENST00000559436 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
ZHX3-216ENST00000559436 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
ZHX3-216ENST00000559436 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
ZHX3-216ENST00000559436 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
ZHX3-216ENST00000559436 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
ZHX3-216ENST00000559436 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
ZHX3-216ENST00000559436 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
ZHX3-216ENST00000559436 WIZO95785 1651 aa17.6■□□□□ 0.41
ZHX3-216ENST00000559436 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
ZHX3-216ENST00000559436 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
ZHX3-216ENST00000559436 CFTRP13569 1480 aa17.47■□□□□ 0.39
ZHX3-216ENST00000559436 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
ZHX3-216ENST00000559436 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
ZHX3-216ENST00000559436 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
ZHX3-216ENST00000559436 IFT140Q96RY7 1462 aa17.33■□□□□ 0.37
ZHX3-216ENST00000559436 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
ZHX3-216ENST00000559436 CHD1O14646 1710 aa17.31■□□□□ 0.36
ZHX3-216ENST00000559436 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
ZHX3-216ENST00000559436 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
ZHX3-216ENST00000559436 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
ZHX3-216ENST00000559436 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
ZHX3-216ENST00000559436 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
ZHX3-216ENST00000559436 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
ZHX3-216ENST00000559436 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
ZHX3-216ENST00000559436 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
ZHX3-216ENST00000559436 FBLN2P98095 1184 aa17.11■□□□□ 0.33
ZHX3-216ENST00000559436 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
ZHX3-216ENST00000559436 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
ZHX3-216ENST00000559436 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
ZHX3-216ENST00000559436 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
ZHX3-216ENST00000559436 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
ZHX3-216ENST00000559436 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
ZHX3-216ENST00000559436 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
ZHX3-216ENST00000559436 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
ZHX3-216ENST00000559436 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
ZHX3-216ENST00000559436 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
ZHX3-216ENST00000559436 SOGA1O94964 1423 aa16.88■□□□□ 0.29
ZHX3-216ENST00000559436 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
ZHX3-216ENST00000559436 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
ZHX3-216ENST00000559436 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
ZHX3-216ENST00000559436 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
ZHX3-216ENST00000559436 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
ZHX3-216ENST00000559436 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
ZHX3-216ENST00000559436 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
ZHX3-216ENST00000559436 CUX1P39880 1505 aa16.76■□□□□ 0.27
ZHX3-216ENST00000559436 KIF13AQ9H1H9 1805 aa16.71■□□□□ 0.27
ZHX3-216ENST00000559436 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
ZHX3-216ENST00000559436 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
ZHX3-216ENST00000559436 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
ZHX3-216ENST00000559436 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
ZHX3-216ENST00000559436 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
ZHX3-216ENST00000559436 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
ZHX3-216ENST00000559436 NUP160Q12769 1436 aa16.58■□□□□ 0.24
ZHX3-216ENST00000559436 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
ZHX3-216ENST00000559436 DIP2BQ9P265 1576 aa16.5■□□□□ 0.23
ZHX3-216ENST00000559436 KDM6BO15054 1643 aa16.49■□□□□ 0.23
ZHX3-216ENST00000559436 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
ZHX3-216ENST00000559436 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
ZHX3-216ENST00000559436 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
ZHX3-216ENST00000559436 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms