RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
MARK3-218ENST00000559274 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
MARK3-218ENST00000559274 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
MARK3-218ENST00000559274 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
MARK3-218ENST00000559274 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
MARK3-218ENST00000559274 ABCC9O60706 1549 aa19.76■□□□□ 0.75
MARK3-218ENST00000559274 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
MARK3-218ENST00000559274 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
MARK3-218ENST00000559274 NACADO15069 1562 aa18.99■□□□□ 0.63
MARK3-218ENST00000559274 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
MARK3-218ENST00000559274 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
MARK3-218ENST00000559274 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
MARK3-218ENST00000559274 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
MARK3-218ENST00000559274 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
MARK3-218ENST00000559274 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
MARK3-218ENST00000559274 FOXD1Q16676 465 aa18.35■□□□□ 0.53
MARK3-218ENST00000559274 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
MARK3-218ENST00000559274 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
MARK3-218ENST00000559274 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
MARK3-218ENST00000559274 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
MARK3-218ENST00000559274 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
MARK3-218ENST00000559274 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
MARK3-218ENST00000559274 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
MARK3-218ENST00000559274 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
MARK3-218ENST00000559274 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
MARK3-218ENST00000559274 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
MARK3-218ENST00000559274 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
MARK3-218ENST00000559274 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
MARK3-218ENST00000559274 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
MARK3-218ENST00000559274 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
MARK3-218ENST00000559274 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
MARK3-218ENST00000559274 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
MARK3-218ENST00000559274 MSH5O43196 834 aa17.28■□□□□ 0.36
MARK3-218ENST00000559274 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
MARK3-218ENST00000559274 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
MARK3-218ENST00000559274 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
MARK3-218ENST00000559274 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
MARK3-218ENST00000559274 ADRA2BP18089 450 aa17.2■□□□□ 0.34
MARK3-218ENST00000559274 CUX2O14529 1486 aa17.09■□□□□ 0.33
MARK3-218ENST00000559274 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
MARK3-218ENST00000559274 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
MARK3-218ENST00000559274 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
MARK3-218ENST00000559274 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
MARK3-218ENST00000559274 WIZO95785 1651 aa16.98■□□□□ 0.31
MARK3-218ENST00000559274 NESP48681 1621 aa16.96■□□□□ 0.31
MARK3-218ENST00000559274 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
MARK3-218ENST00000559274 CFTRP13569 1480 aa16.82■□□□□ 0.28
MARK3-218ENST00000559274 DNAJC5Q9H3Z4 198 aa16.8■□□□□ 0.28
MARK3-218ENST00000559274 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
MARK3-218ENST00000559274 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
MARK3-218ENST00000559274 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
MARK3-218ENST00000559274 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
MARK3-218ENST00000559274 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
MARK3-218ENST00000559274 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
MARK3-218ENST00000559274 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
MARK3-218ENST00000559274 WDR62O43379 1518 aa16.69■□□□□ 0.26
MARK3-218ENST00000559274 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
MARK3-218ENST00000559274 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
MARK3-218ENST00000559274 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
MARK3-218ENST00000559274 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
MARK3-218ENST00000559274 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
MARK3-218ENST00000559274 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
MARK3-218ENST00000559274 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
MARK3-218ENST00000559274 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
MARK3-218ENST00000559274 SOGA1O94964 1423 aa16.3■□□□□ 0.2
MARK3-218ENST00000559274 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
MARK3-218ENST00000559274 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
MARK3-218ENST00000559274 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
MARK3-218ENST00000559274 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
MARK3-218ENST00000559274 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
MARK3-218ENST00000559274 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■■■□□ 17
MARK3-218ENST00000559274 EIF4G3O43432 1585 aaKnown RBP16.19■□□□□ 0.18
MARK3-218ENST00000559274 FBLN2P98095 1184 aa16.19■□□□□ 0.18
MARK3-218ENST00000559274 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
MARK3-218ENST00000559274 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
MARK3-218ENST00000559274 CUX1P39880 1505 aa16.17■□□□□ 0.18
MARK3-218ENST00000559274 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
MARK3-218ENST00000559274 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
MARK3-218ENST00000559274 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
MARK3-218ENST00000559274 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
MARK3-218ENST00000559274 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
MARK3-218ENST00000559274 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
MARK3-218ENST00000559274 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
MARK3-218ENST00000559274 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
MARK3-218ENST00000559274 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
MARK3-218ENST00000559274 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
MARK3-218ENST00000559274 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
MARK3-218ENST00000559274 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
MARK3-218ENST00000559274 CHD1O14646 1710 aa15.98■□□□□ 0.15
MARK3-218ENST00000559274 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
MARK3-218ENST00000559274 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
MARK3-218ENST00000559274 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
MARK3-218ENST00000559274 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
MARK3-218ENST00000559274 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
MARK3-218ENST00000559274 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
MARK3-218ENST00000559274 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
MARK3-218ENST00000559274 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
MARK3-218ENST00000559274 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
MARK3-218ENST00000559274 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
MARK3-218ENST00000559274 GRIN2AQ12879 1464 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms