RNA–Protein interactions for RNA: ENST00000557946.1

AC104261.1-202, humanhuman

TSL 3 BASIC

Gene AC104261.1, Length 509 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104261.1-202ENST00000557946 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
AC104261.1-202ENST00000557946 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
AC104261.1-202ENST00000557946 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
AC104261.1-202ENST00000557946 CCDC180Q9P1Z9 1646 aa19.08■□□□□ 0.65
AC104261.1-202ENST00000557946 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
AC104261.1-202ENST00000557946 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
AC104261.1-202ENST00000557946 ABCC9O60706 1549 aa18.36■□□□□ 0.53
AC104261.1-202ENST00000557946 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
AC104261.1-202ENST00000557946 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
AC104261.1-202ENST00000557946 NACADO15069 1562 aa17.75■□□□□ 0.43
AC104261.1-202ENST00000557946 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
AC104261.1-202ENST00000557946 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
AC104261.1-202ENST00000557946 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
AC104261.1-202ENST00000557946 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
AC104261.1-202ENST00000557946 FOXD1Q16676 465 aa17.5■□□□□ 0.39
AC104261.1-202ENST00000557946 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
AC104261.1-202ENST00000557946 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
AC104261.1-202ENST00000557946 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC104261.1-202ENST00000557946 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
AC104261.1-202ENST00000557946 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.27
AC104261.1-202ENST00000557946 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
AC104261.1-202ENST00000557946 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
AC104261.1-202ENST00000557946 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
AC104261.1-202ENST00000557946 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
AC104261.1-202ENST00000557946 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
AC104261.1-202ENST00000557946 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
AC104261.1-202ENST00000557946 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
AC104261.1-202ENST00000557946 WIZO95785 1651 aa16.48■□□□□ 0.23
AC104261.1-202ENST00000557946 MSH5O43196 834 aa16.44■□□□□ 0.22
AC104261.1-202ENST00000557946 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
AC104261.1-202ENST00000557946 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
AC104261.1-202ENST00000557946 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
AC104261.1-202ENST00000557946 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
AC104261.1-202ENST00000557946 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
AC104261.1-202ENST00000557946 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
AC104261.1-202ENST00000557946 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
AC104261.1-202ENST00000557946 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
AC104261.1-202ENST00000557946 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
AC104261.1-202ENST00000557946 ADRA2BP18089 450 aa16.27■□□□□ 0.2
AC104261.1-202ENST00000557946 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
AC104261.1-202ENST00000557946 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
AC104261.1-202ENST00000557946 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
AC104261.1-202ENST00000557946 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
AC104261.1-202ENST00000557946 NESP48681 1621 aa15.98■□□□□ 0.15
AC104261.1-202ENST00000557946 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
AC104261.1-202ENST00000557946 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
AC104261.1-202ENST00000557946 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
AC104261.1-202ENST00000557946 CFTRP13569 1480 aa15.82■□□□□ 0.12
AC104261.1-202ENST00000557946 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
AC104261.1-202ENST00000557946 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
AC104261.1-202ENST00000557946 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
AC104261.1-202ENST00000557946 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
AC104261.1-202ENST00000557946 PDS5BQ9NTI5 1447 aa15.7■□□□□ 0.1
AC104261.1-202ENST00000557946 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
AC104261.1-202ENST00000557946 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
AC104261.1-202ENST00000557946 WDR62O43379 1518 aa15.61■□□□□ 0.09
AC104261.1-202ENST00000557946 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
AC104261.1-202ENST00000557946 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
AC104261.1-202ENST00000557946 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
AC104261.1-202ENST00000557946 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
AC104261.1-202ENST00000557946 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
AC104261.1-202ENST00000557946 CUX1P39880 1505 aa15.52■□□□□ 0.07
AC104261.1-202ENST00000557946 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
AC104261.1-202ENST00000557946 CUX2O14529 1486 aa15.51■□□□□ 0.07
AC104261.1-202ENST00000557946 WDR97A6NE52 1622 aa15.46■□□□□ 0.06
AC104261.1-202ENST00000557946 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
AC104261.1-202ENST00000557946 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
AC104261.1-202ENST00000557946 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
AC104261.1-202ENST00000557946 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
AC104261.1-202ENST00000557946 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
AC104261.1-202ENST00000557946 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
AC104261.1-202ENST00000557946 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
AC104261.1-202ENST00000557946 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
AC104261.1-202ENST00000557946 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
AC104261.1-202ENST00000557946 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
AC104261.1-202ENST00000557946 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
AC104261.1-202ENST00000557946 SOGA1O94964 1423 aa15.25■□□□□ 0.03
AC104261.1-202ENST00000557946 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
AC104261.1-202ENST00000557946 CHD1O14646 1710 aa15.22■□□□□ 0.03
AC104261.1-202ENST00000557946 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.02
AC104261.1-202ENST00000557946 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
AC104261.1-202ENST00000557946 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
AC104261.1-202ENST00000557946 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
AC104261.1-202ENST00000557946 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
AC104261.1-202ENST00000557946 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
AC104261.1-202ENST00000557946 TRIM41Q8WV44 630 aa15.08■□□□□ 0
AC104261.1-202ENST00000557946 CUL7Q14999 1698 aa15.07■□□□□ 0
AC104261.1-202ENST00000557946 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
AC104261.1-202ENST00000557946 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
AC104261.1-202ENST00000557946 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
AC104261.1-202ENST00000557946 KIF27Q86VH2 1401 aa15.02■□□□□ -0
AC104261.1-202ENST00000557946 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
AC104261.1-202ENST00000557946 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
AC104261.1-202ENST00000557946 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
AC104261.1-202ENST00000557946 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
AC104261.1-202ENST00000557946 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
AC104261.1-202ENST00000557946 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
AC104261.1-202ENST00000557946 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
AC104261.1-202ENST00000557946 IGF1RP08069 1367 aa14.9□□□□□ -0.02
AC104261.1-202ENST00000557946 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms