RNA–Protein interactions for RNA: ENST00000557367.2

RPS29-207, Transcript of ribosomal protein S29, humanhuman

TSL 2

Gene RPS29, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-207ENST00000557367 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
RPS29-207ENST00000557367 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
RPS29-207ENST00000557367 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
RPS29-207ENST00000557367 ABCC9O60706 1549 aa29.5■■■□□ 2.31
RPS29-207ENST00000557367 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
RPS29-207ENST00000557367 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
RPS29-207ENST00000557367 DCAF8L2P0C7V8 631 aa28.02■■■□□ 2.08
RPS29-207ENST00000557367 NACADO15069 1562 aa28.02■■■□□ 2.08
RPS29-207ENST00000557367 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
RPS29-207ENST00000557367 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
RPS29-207ENST00000557367 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
RPS29-207ENST00000557367 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
RPS29-207ENST00000557367 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
RPS29-207ENST00000557367 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
RPS29-207ENST00000557367 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
RPS29-207ENST00000557367 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
RPS29-207ENST00000557367 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
RPS29-207ENST00000557367 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
RPS29-207ENST00000557367 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
RPS29-207ENST00000557367 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
RPS29-207ENST00000557367 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
RPS29-207ENST00000557367 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
RPS29-207ENST00000557367 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
RPS29-207ENST00000557367 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
RPS29-207ENST00000557367 SMARCA4P51532 1647 aa25.82■■□□□ 1.72
RPS29-207ENST00000557367 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
RPS29-207ENST00000557367 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
RPS29-207ENST00000557367 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
RPS29-207ENST00000557367 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
RPS29-207ENST00000557367 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.69
RPS29-207ENST00000557367 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
RPS29-207ENST00000557367 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
RPS29-207ENST00000557367 NESP48681 1621 aa25.38■■□□□ 1.65
RPS29-207ENST00000557367 CUX2O14529 1486 aa25.33■■□□□ 1.65
RPS29-207ENST00000557367 WIZO95785 1651 aa25.23■■□□□ 1.63
RPS29-207ENST00000557367 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
RPS29-207ENST00000557367 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
RPS29-207ENST00000557367 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
RPS29-207ENST00000557367 POTEDQ86YR6 584 aa25.14■■□□□ 1.62
RPS29-207ENST00000557367 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
RPS29-207ENST00000557367 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
RPS29-207ENST00000557367 FOXD1Q16676 465 aa25.09■■□□□ 1.61
RPS29-207ENST00000557367 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
RPS29-207ENST00000557367 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
RPS29-207ENST00000557367 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
RPS29-207ENST00000557367 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
RPS29-207ENST00000557367 CFTRP13569 1480 aa24.88■■□□□ 1.57
RPS29-207ENST00000557367 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
RPS29-207ENST00000557367 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.56
RPS29-207ENST00000557367 WDR62O43379 1518 aa24.79■■□□□ 1.56
RPS29-207ENST00000557367 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
RPS29-207ENST00000557367 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
RPS29-207ENST00000557367 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
RPS29-207ENST00000557367 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
RPS29-207ENST00000557367 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
RPS29-207ENST00000557367 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
RPS29-207ENST00000557367 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
RPS29-207ENST00000557367 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
RPS29-207ENST00000557367 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
RPS29-207ENST00000557367 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
RPS29-207ENST00000557367 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
RPS29-207ENST00000557367 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
RPS29-207ENST00000557367 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
RPS29-207ENST00000557367 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.457e-11■■■■■ 26.9
RPS29-207ENST00000557367 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
RPS29-207ENST00000557367 SOGA1O94964 1423 aa24.06■■□□□ 1.44
RPS29-207ENST00000557367 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
RPS29-207ENST00000557367 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
RPS29-207ENST00000557367 CUX1P39880 1505 aa24.02■■□□□ 1.44
RPS29-207ENST00000557367 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
RPS29-207ENST00000557367 MSH5O43196 834 aa23.96■■□□□ 1.43
RPS29-207ENST00000557367 FBLN2P98095 1184 aa23.93■■□□□ 1.42
RPS29-207ENST00000557367 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
RPS29-207ENST00000557367 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
RPS29-207ENST00000557367 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
RPS29-207ENST00000557367 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
RPS29-207ENST00000557367 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
RPS29-207ENST00000557367 CHD1O14646 1710 aa23.81■■□□□ 1.4
RPS29-207ENST00000557367 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
RPS29-207ENST00000557367 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
RPS29-207ENST00000557367 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
RPS29-207ENST00000557367 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
RPS29-207ENST00000557367 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
RPS29-207ENST00000557367 ABCA10Q8WWZ4 1543 aa23.76■■□□□ 1.39
RPS29-207ENST00000557367 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.392e-7■□□□□ 9.9
RPS29-207ENST00000557367 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
RPS29-207ENST00000557367 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
RPS29-207ENST00000557367 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
RPS29-207ENST00000557367 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
RPS29-207ENST00000557367 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
RPS29-207ENST00000557367 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
RPS29-207ENST00000557367 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
RPS29-207ENST00000557367 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
RPS29-207ENST00000557367 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
RPS29-207ENST00000557367 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
RPS29-207ENST00000557367 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
RPS29-207ENST00000557367 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
RPS29-207ENST00000557367 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
RPS29-207ENST00000557367 NUP160Q12769 1436 aa23.42■■□□□ 1.34
RPS29-207ENST00000557367 CEP170Q5SW79 1584 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms