RNA–Protein interactions for RNA: ENST00000556464.5

CDK2-211, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 609 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-211ENST00000556464 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
CDK2-211ENST00000556464 ABCC9O60706 1549 aa30.78■■■□□ 2.52
CDK2-211ENST00000556464 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
CDK2-211ENST00000556464 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
CDK2-211ENST00000556464 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
CDK2-211ENST00000556464 NACADO15069 1562 aa28.51■■■□□ 2.15
CDK2-211ENST00000556464 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
CDK2-211ENST00000556464 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
CDK2-211ENST00000556464 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
CDK2-211ENST00000556464 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
CDK2-211ENST00000556464 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
CDK2-211ENST00000556464 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
CDK2-211ENST00000556464 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
CDK2-211ENST00000556464 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
CDK2-211ENST00000556464 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
CDK2-211ENST00000556464 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
CDK2-211ENST00000556464 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
CDK2-211ENST00000556464 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
CDK2-211ENST00000556464 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
CDK2-211ENST00000556464 CUX2O14529 1486 aa26.98■■□□□ 1.91
CDK2-211ENST00000556464 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
CDK2-211ENST00000556464 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
CDK2-211ENST00000556464 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
CDK2-211ENST00000556464 NESP48681 1621 aa26.18■■□□□ 1.78
CDK2-211ENST00000556464 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
CDK2-211ENST00000556464 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
CDK2-211ENST00000556464 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
CDK2-211ENST00000556464 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
CDK2-211ENST00000556464 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
CDK2-211ENST00000556464 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
CDK2-211ENST00000556464 SMARCA4P51532 1647 aa25.82■■□□□ 1.72
CDK2-211ENST00000556464 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
CDK2-211ENST00000556464 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
CDK2-211ENST00000556464 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
CDK2-211ENST00000556464 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
CDK2-211ENST00000556464 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
CDK2-211ENST00000556464 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
CDK2-211ENST00000556464 WDR62O43379 1518 aa25.56■■□□□ 1.68
CDK2-211ENST00000556464 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
CDK2-211ENST00000556464 RIMBP3CA6NJZ7 1639 aa25.35■■□□□ 1.65
CDK2-211ENST00000556464 RIMBP3BA6NNM3 1639 aa25.35■■□□□ 1.65
CDK2-211ENST00000556464 RIMBP3Q9UFD9 1639 aa25.35■■□□□ 1.65
CDK2-211ENST00000556464 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
CDK2-211ENST00000556464 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
CDK2-211ENST00000556464 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
CDK2-211ENST00000556464 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
CDK2-211ENST00000556464 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
CDK2-211ENST00000556464 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
CDK2-211ENST00000556464 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
CDK2-211ENST00000556464 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
CDK2-211ENST00000556464 CFTRP13569 1480 aa24.97■■□□□ 1.59
CDK2-211ENST00000556464 WIZO95785 1651 aa24.94■■□□□ 1.58
CDK2-211ENST00000556464 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
CDK2-211ENST00000556464 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
CDK2-211ENST00000556464 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
CDK2-211ENST00000556464 CHD1O14646 1710 aa24.71■■□□□ 1.55
CDK2-211ENST00000556464 RSF1Q96T23 1441 aaPredicted RBP24.7■■□□□ 1.55
CDK2-211ENST00000556464 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
CDK2-211ENST00000556464 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
CDK2-211ENST00000556464 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
CDK2-211ENST00000556464 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
CDK2-211ENST00000556464 FBLN2P98095 1184 aa24.52■■□□□ 1.52
CDK2-211ENST00000556464 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.511e-19■■■■■ 87.5
CDK2-211ENST00000556464 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
CDK2-211ENST00000556464 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
CDK2-211ENST00000556464 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
CDK2-211ENST00000556464 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
CDK2-211ENST00000556464 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
CDK2-211ENST00000556464 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
CDK2-211ENST00000556464 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
CDK2-211ENST00000556464 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
CDK2-211ENST00000556464 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
CDK2-211ENST00000556464 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
CDK2-211ENST00000556464 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
CDK2-211ENST00000556464 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
CDK2-211ENST00000556464 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
CDK2-211ENST00000556464 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
CDK2-211ENST00000556464 SOGA1O94964 1423 aa24.14■■□□□ 1.45
CDK2-211ENST00000556464 ILDR1Q86SU0 546 aaPredicted RBP24.1■■□□□ 1.45
CDK2-211ENST00000556464 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
CDK2-211ENST00000556464 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
CDK2-211ENST00000556464 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
CDK2-211ENST00000556464 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
CDK2-211ENST00000556464 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
CDK2-211ENST00000556464 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
CDK2-211ENST00000556464 KDM4FA0A1W2PPD8 638 aa23.84■■□□□ 1.41
CDK2-211ENST00000556464 CUX1P39880 1505 aa23.8■■□□□ 1.4
CDK2-211ENST00000556464 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
CDK2-211ENST00000556464 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
CDK2-211ENST00000556464 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
CDK2-211ENST00000556464 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
CDK2-211ENST00000556464 NUP160Q12769 1436 aa23.7■■□□□ 1.38
CDK2-211ENST00000556464 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
CDK2-211ENST00000556464 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
CDK2-211ENST00000556464 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
CDK2-211ENST00000556464 KDM6BO15054 1643 aa23.65■■□□□ 1.38
CDK2-211ENST00000556464 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
CDK2-211ENST00000556464 DIP2BQ9P265 1576 aa23.59■■□□□ 1.37
CDK2-211ENST00000556464 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
CDK2-211ENST00000556464 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms