RNA–Protein interactions for RNA: ENST00000556257.5

MLH3-210, Transcript of mutL homolog 3, humanhuman

TSL 5 BASIC

Gene MLH3, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-210ENST00000556257 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.62
MLH3-210ENST00000556257 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
MLH3-210ENST00000556257 ABCC9O60706 1549 aa9.85□□□□□ -0.83
MLH3-210ENST00000556257 DCAF8L2P0C7V8 631 aa9.78□□□□□ -0.84
MLH3-210ENST00000556257 RB1CC1Q8TDY2 1594 aa9.53□□□□□ -0.88
MLH3-210ENST00000556257 NACADO15069 1562 aa9.46□□□□□ -0.89
MLH3-210ENST00000556257 MYO15BQ96JP2 1530 aa9.3□□□□□ -0.92
MLH3-210ENST00000556257 CHIC1Q5VXU3 224 aa9.26□□□□□ -0.93
MLH3-210ENST00000556257 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
MLH3-210ENST00000556257 DCAF1Q9Y4B6 1507 aa9.23□□□□□ -0.93
MLH3-210ENST00000556257 PABPN1Q86U42 306 aaKnown RBP eCLIP9.22□□□□□ -0.93
MLH3-210ENST00000556257 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
MLH3-210ENST00000556257 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
MLH3-210ENST00000556257 SCRIBQ14160 1630 aa9.09□□□□□ -0.96
MLH3-210ENST00000556257 EHMT2Q96KQ7 1210 aa8.99□□□□□ -0.97
MLH3-210ENST00000556257 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.99
MLH3-210ENST00000556257 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
MLH3-210ENST00000556257 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
MLH3-210ENST00000556257 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
MLH3-210ENST00000556257 CC2D2AQ9P2K1 1620 aa8.8□□□□□ -1
MLH3-210ENST00000556257 DNAJC5BQ9UF47 199 aa8.79□□□□□ -1
MLH3-210ENST00000556257 SMARCA2P51531 1590 aa8.78□□□□□ -1
MLH3-210ENST00000556257 BAZ1AQ9NRL2 1556 aaPredicted RBP8.77□□□□□ -1.01
MLH3-210ENST00000556257 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
MLH3-210ENST00000556257 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
MLH3-210ENST00000556257 NCAPD3P42695 1498 aa8.66□□□□□ -1.02
MLH3-210ENST00000556257 SMARCA4P51532 1647 aa8.65□□□□□ -1.03
MLH3-210ENST00000556257 ATAD2BQ9ULI0 1458 aa8.64□□□□□ -1.03
MLH3-210ENST00000556257 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
MLH3-210ENST00000556257 PDS5BQ9NTI5 1447 aa8.61□□□□□ -1.03
MLH3-210ENST00000556257 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
MLH3-210ENST00000556257 AEBP2Q6ZN18 517 aaPredicted RBP8.53□□□□□ -1.04
MLH3-210ENST00000556257 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
MLH3-210ENST00000556257 CADPSQ9ULU8 1353 aa8.5□□□□□ -1.05
MLH3-210ENST00000556257 LAMC3Q9Y6N6 1575 aa8.5□□□□□ -1.05
MLH3-210ENST00000556257 CUX2O14529 1486 aa8.49□□□□□ -1.05
MLH3-210ENST00000556257 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
MLH3-210ENST00000556257 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.05
MLH3-210ENST00000556257 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
MLH3-210ENST00000556257 TOP2AP11388 1531 aaKnown RBP8.45□□□□□ -1.06
MLH3-210ENST00000556257 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
MLH3-210ENST00000556257 ABCC8Q09428 1581 aa8.42□□□□□ -1.06
MLH3-210ENST00000556257 MRC2Q9UBG0 1479 aa8.41□□□□□ -1.06
MLH3-210ENST00000556257 WIZO95785 1651 aa8.4□□□□□ -1.06
MLH3-210ENST00000556257 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
MLH3-210ENST00000556257 NESP48681 1621 aa8.35□□□□□ -1.07
MLH3-210ENST00000556257 CFTRP13569 1480 aa8.33□□□□□ -1.08
MLH3-210ENST00000556257 FBLN2P98095 1184 aa8.31□□□□□ -1.08
MLH3-210ENST00000556257 AMER1Q5JTC6 1135 aaPredicted RBP8.31□□□□□ -1.08
MLH3-210ENST00000556257 RTN4Q9NQC3 1192 aaKnown RBP8.3□□□□□ -1.08
MLH3-210ENST00000556257 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
MLH3-210ENST00000556257 OSCARQ8IYS5 282 aa8.29□□□□□ -1.08
MLH3-210ENST00000556257 PLPPR3Q6T4P5 718 aa8.28□□□□□ -1.08
MLH3-210ENST00000556257 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
MLH3-210ENST00000556257 IFT140Q96RY7 1462 aa8.27□□□□□ -1.09
MLH3-210ENST00000556257 CHMP7Q8WUX9 453 aaPredicted RBP8.26□□□□□ -1.09
MLH3-210ENST00000556257 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
MLH3-210ENST00000556257 KIF21AQ7Z4S6 1674 aa8.24□□□□□ -1.09
MLH3-210ENST00000556257 WDR62O43379 1518 aa8.23□□□□□ -1.09
MLH3-210ENST00000556257 SOGA1O94964 1423 aa8.21□□□□□ -1.1
MLH3-210ENST00000556257 PRDM2Q13029 1718 aa8.21□□□□□ -1.1
MLH3-210ENST00000556257 DNMBPQ6XZF7 1577 aa8.21□□□□□ -1.1
MLH3-210ENST00000556257 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
MLH3-210ENST00000556257 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
MLH3-210ENST00000556257 DAXXQ9UER7 740 aaPredicted RBP8.18□□□□□ -1.1
MLH3-210ENST00000556257 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
MLH3-210ENST00000556257 TRIM41Q8WV44 630 aa8.17□□□□□ -1.1
MLH3-210ENST00000556257 NPM1P06748 294 aaKnown RBP eCLIP8.17□□□□□ -1.1
MLH3-210ENST00000556257 PHF23Q9BUL5 403 aaPredicted RBP8.14□□□□□ -1.11
MLH3-210ENST00000556257 EEA1Q15075 1411 aa8.14□□□□□ -1.11
MLH3-210ENST00000556257 URB2Q14146 1524 aaKnown RBP8.14□□□□□ -1.11
MLH3-210ENST00000556257 NCBP3Q53F19 620 aaKnown RBP8.13□□□□□ -1.11
MLH3-210ENST00000556257 GRIN2BQ13224 1484 aa8.12□□□□□ -1.11
MLH3-210ENST00000556257 WDR97A6NE52 1622 aa8.12□□□□□ -1.11
MLH3-210ENST00000556257 FGD5Q6ZNL6 1462 aa8.11□□□□□ -1.11
MLH3-210ENST00000556257 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
MLH3-210ENST00000556257 KIF27Q86VH2 1401 aa8.09□□□□□ -1.11
MLH3-210ENST00000556257 POLA1P09884 1462 aaPredicted RBP8.08□□□□□ -1.12
MLH3-210ENST00000556257 GAPVD1Q14C86 1478 aa8.08□□□□□ -1.12
MLH3-210ENST00000556257 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
MLH3-210ENST00000556257 MAGI1Q96QZ7 1491 aaPredicted RBP8.08□□□□□ -1.12
MLH3-210ENST00000556257 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
MLH3-210ENST00000556257 KCNA4P22459 653 aa8.06□□□□□ -1.12
MLH3-210ENST00000556257 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.12
MLH3-210ENST00000556257 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
MLH3-210ENST00000556257 TRIM26Q12899 539 aaPredicted RBP8.04□□□□□ -1.12
MLH3-210ENST00000556257 CSRNP3Q8WYN3 585 aa8.04□□□□□ -1.12
MLH3-210ENST00000556257 RAD54L2Q9Y4B4 1467 aa8.03□□□□□ -1.12
MLH3-210ENST00000556257 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
MLH3-210ENST00000556257 SYNJ2O15056 1496 aa8.03□□□□□ -1.12
MLH3-210ENST00000556257 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
MLH3-210ENST00000556257 FHAD1B1AJZ9 1412 aa8.02□□□□□ -1.13
MLH3-210ENST00000556257 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
MLH3-210ENST00000556257 CARMIL2Q6F5E8 1435 aa8.02□□□□□ -1.13
MLH3-210ENST00000556257 ABCA10Q8WWZ4 1543 aa8.01□□□□□ -1.13
MLH3-210ENST00000556257 CUX1P39880 1505 aa8.01□□□□□ -1.13
MLH3-210ENST00000556257 ZNF608Q9ULD9 1512 aaPredicted RBP8□□□□□ -1.13
MLH3-210ENST00000556257 TOP2BQ02880 1626 aa7.99□□□□□ -1.13
MLH3-210ENST00000556257 TTBK1Q5TCY1 1321 aaPredicted RBP7.99□□□□□ -1.13
MLH3-210ENST00000556257 SLC4A1APQ9BWU0 796 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms