RNA–Protein interactions for RNA: ENST00000556080.1

AL135838.1-201, humanhuman

TSL 3 BASIC

Gene AL135838.1, Length 235 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL135838.1-201ENST00000556080 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
AL135838.1-201ENST00000556080 ABCC9O60706 1549 aa15.44■□□□□ 0.06
AL135838.1-201ENST00000556080 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
AL135838.1-201ENST00000556080 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
AL135838.1-201ENST00000556080 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
AL135838.1-201ENST00000556080 NACADO15069 1562 aa14.29□□□□□ -0.12
AL135838.1-201ENST00000556080 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
AL135838.1-201ENST00000556080 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
AL135838.1-201ENST00000556080 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
AL135838.1-201ENST00000556080 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
AL135838.1-201ENST00000556080 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
AL135838.1-201ENST00000556080 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
AL135838.1-201ENST00000556080 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
AL135838.1-201ENST00000556080 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
AL135838.1-201ENST00000556080 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
AL135838.1-201ENST00000556080 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
AL135838.1-201ENST00000556080 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
AL135838.1-201ENST00000556080 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
AL135838.1-201ENST00000556080 CUX2O14529 1486 aa13.55□□□□□ -0.24
AL135838.1-201ENST00000556080 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
AL135838.1-201ENST00000556080 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
AL135838.1-201ENST00000556080 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
AL135838.1-201ENST00000556080 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
AL135838.1-201ENST00000556080 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
AL135838.1-201ENST00000556080 NESP48681 1621 aa13.1□□□□□ -0.31
AL135838.1-201ENST00000556080 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
AL135838.1-201ENST00000556080 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
AL135838.1-201ENST00000556080 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
AL135838.1-201ENST00000556080 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
AL135838.1-201ENST00000556080 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
AL135838.1-201ENST00000556080 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
AL135838.1-201ENST00000556080 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
AL135838.1-201ENST00000556080 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
AL135838.1-201ENST00000556080 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
AL135838.1-201ENST00000556080 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
AL135838.1-201ENST00000556080 WDR62O43379 1518 aa12.83□□□□□ -0.36
AL135838.1-201ENST00000556080 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
AL135838.1-201ENST00000556080 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
AL135838.1-201ENST00000556080 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
AL135838.1-201ENST00000556080 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
AL135838.1-201ENST00000556080 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
AL135838.1-201ENST00000556080 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
AL135838.1-201ENST00000556080 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
AL135838.1-201ENST00000556080 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
AL135838.1-201ENST00000556080 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
AL135838.1-201ENST00000556080 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
AL135838.1-201ENST00000556080 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
AL135838.1-201ENST00000556080 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
AL135838.1-201ENST00000556080 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
AL135838.1-201ENST00000556080 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
AL135838.1-201ENST00000556080 CFTRP13569 1480 aa12.49□□□□□ -0.41
AL135838.1-201ENST00000556080 WIZO95785 1651 aa12.48□□□□□ -0.41
AL135838.1-201ENST00000556080 IFT140Q96RY7 1462 aa12.46□□□□□ -0.42
AL135838.1-201ENST00000556080 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
AL135838.1-201ENST00000556080 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
AL135838.1-201ENST00000556080 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
AL135838.1-201ENST00000556080 CHD1O14646 1710 aa12.4□□□□□ -0.42
AL135838.1-201ENST00000556080 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
AL135838.1-201ENST00000556080 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
AL135838.1-201ENST00000556080 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
AL135838.1-201ENST00000556080 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
AL135838.1-201ENST00000556080 FBLN2P98095 1184 aa12.31□□□□□ -0.44
AL135838.1-201ENST00000556080 ABCC8Q09428 1581 aa12.29□□□□□ -0.44
AL135838.1-201ENST00000556080 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.45
AL135838.1-201ENST00000556080 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
AL135838.1-201ENST00000556080 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
AL135838.1-201ENST00000556080 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
AL135838.1-201ENST00000556080 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
AL135838.1-201ENST00000556080 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
AL135838.1-201ENST00000556080 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
AL135838.1-201ENST00000556080 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
AL135838.1-201ENST00000556080 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
AL135838.1-201ENST00000556080 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
AL135838.1-201ENST00000556080 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
AL135838.1-201ENST00000556080 MAGI1Q96QZ7 1491 aaPredicted RBP12.13□□□□□ -0.47
AL135838.1-201ENST00000556080 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
AL135838.1-201ENST00000556080 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
AL135838.1-201ENST00000556080 SOGA1O94964 1423 aa12.09□□□□□ -0.47
AL135838.1-201ENST00000556080 SYNJ2O15056 1496 aa12.08□□□□□ -0.47
AL135838.1-201ENST00000556080 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
AL135838.1-201ENST00000556080 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
AL135838.1-201ENST00000556080 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
AL135838.1-201ENST00000556080 PBRM1Q86U86 1689 aa12.02□□□□□ -0.49
AL135838.1-201ENST00000556080 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
AL135838.1-201ENST00000556080 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
AL135838.1-201ENST00000556080 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
AL135838.1-201ENST00000556080 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
AL135838.1-201ENST00000556080 CUX1P39880 1505 aa11.91□□□□□ -0.5
AL135838.1-201ENST00000556080 KDM6BO15054 1643 aa11.9□□□□□ -0.5
AL135838.1-201ENST00000556080 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
AL135838.1-201ENST00000556080 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
AL135838.1-201ENST00000556080 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
AL135838.1-201ENST00000556080 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
AL135838.1-201ENST00000556080 NUP160Q12769 1436 aa11.86□□□□□ -0.51
AL135838.1-201ENST00000556080 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
AL135838.1-201ENST00000556080 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
AL135838.1-201ENST00000556080 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
AL135838.1-201ENST00000556080 ABCA10Q8WWZ4 1543 aa11.85□□□□□ -0.51
AL135838.1-201ENST00000556080 MAPKBP1O60336 1514 aa11.83□□□□□ -0.52
AL135838.1-201ENST00000556080 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms