RNA–Protein interactions for RNA: ENST00000555417.5

AP4S1-207, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3

Gene AP4S1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-207ENST00000555417 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
AP4S1-207ENST00000555417 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
AP4S1-207ENST00000555417 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
AP4S1-207ENST00000555417 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
AP4S1-207ENST00000555417 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
AP4S1-207ENST00000555417 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.48
AP4S1-207ENST00000555417 ABCC9O60706 1549 aa18.03■□□□□ 0.48
AP4S1-207ENST00000555417 FOXD1Q16676 465 aa17.85■□□□□ 0.45
AP4S1-207ENST00000555417 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
AP4S1-207ENST00000555417 NACADO15069 1562 aa17.1■□□□□ 0.33
AP4S1-207ENST00000555417 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
AP4S1-207ENST00000555417 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
AP4S1-207ENST00000555417 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
AP4S1-207ENST00000555417 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
AP4S1-207ENST00000555417 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
AP4S1-207ENST00000555417 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
AP4S1-207ENST00000555417 UNC13AQ9UPW8 1703 aa16.78■□□□□ 0.28
AP4S1-207ENST00000555417 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
AP4S1-207ENST00000555417 MSH5O43196 834 aa16.7■□□□□ 0.26
AP4S1-207ENST00000555417 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
AP4S1-207ENST00000555417 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
AP4S1-207ENST00000555417 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
AP4S1-207ENST00000555417 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
AP4S1-207ENST00000555417 ADRA2BP18089 450 aa16.62■□□□□ 0.25
AP4S1-207ENST00000555417 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
AP4S1-207ENST00000555417 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
AP4S1-207ENST00000555417 CC2D2AQ9P2K1 1620 aa16.28■□□□□ 0.2
AP4S1-207ENST00000555417 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
AP4S1-207ENST00000555417 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
AP4S1-207ENST00000555417 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
AP4S1-207ENST00000555417 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
AP4S1-207ENST00000555417 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
AP4S1-207ENST00000555417 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
AP4S1-207ENST00000555417 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
AP4S1-207ENST00000555417 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
AP4S1-207ENST00000555417 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
AP4S1-207ENST00000555417 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
AP4S1-207ENST00000555417 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
AP4S1-207ENST00000555417 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
AP4S1-207ENST00000555417 NESP48681 1621 aa15.52■□□□□ 0.08
AP4S1-207ENST00000555417 CUX2O14529 1486 aa15.49■□□□□ 0.07
AP4S1-207ENST00000555417 HRCP23327 699 aa15.47■□□□□ 0.07
AP4S1-207ENST00000555417 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
AP4S1-207ENST00000555417 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
AP4S1-207ENST00000555417 WIZO95785 1651 aa15.41■□□□□ 0.06
AP4S1-207ENST00000555417 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
AP4S1-207ENST00000555417 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
AP4S1-207ENST00000555417 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
AP4S1-207ENST00000555417 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
AP4S1-207ENST00000555417 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
AP4S1-207ENST00000555417 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
AP4S1-207ENST00000555417 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
AP4S1-207ENST00000555417 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
AP4S1-207ENST00000555417 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
AP4S1-207ENST00000555417 CFTRP13569 1480 aa15.18■□□□□ 0.02
AP4S1-207ENST00000555417 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
AP4S1-207ENST00000555417 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
AP4S1-207ENST00000555417 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
AP4S1-207ENST00000555417 WDR62O43379 1518 aa15.14■□□□□ 0.01
AP4S1-207ENST00000555417 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
AP4S1-207ENST00000555417 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
AP4S1-207ENST00000555417 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
AP4S1-207ENST00000555417 ZEB1P37275 1124 aaPredicted RBP15.04■□□□□ -0
AP4S1-207ENST00000555417 PELP1Q8IZL8 1130 aaKnown RBP15.02■□□□□ -0
AP4S1-207ENST00000555417 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
AP4S1-207ENST00000555417 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
AP4S1-207ENST00000555417 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
AP4S1-207ENST00000555417 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
AP4S1-207ENST00000555417 PPP4R3CPQ6ZMV5 832 aa14.86□□□□□ -0.03
AP4S1-207ENST00000555417 IFT140Q96RY7 1462 aa14.84□□□□□ -0.03
AP4S1-207ENST00000555417 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
AP4S1-207ENST00000555417 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
AP4S1-207ENST00000555417 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
AP4S1-207ENST00000555417 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
AP4S1-207ENST00000555417 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
AP4S1-207ENST00000555417 POLA1P09884 1462 aaPredicted RBP14.73□□□□□ -0.05
AP4S1-207ENST00000555417 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
AP4S1-207ENST00000555417 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
AP4S1-207ENST00000555417 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.06
AP4S1-207ENST00000555417 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
AP4S1-207ENST00000555417 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
AP4S1-207ENST00000555417 SOGA1O94964 1423 aa14.67□□□□□ -0.06
AP4S1-207ENST00000555417 CUX1P39880 1505 aa14.65□□□□□ -0.06
AP4S1-207ENST00000555417 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
AP4S1-207ENST00000555417 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
AP4S1-207ENST00000555417 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
AP4S1-207ENST00000555417 FBLN2P98095 1184 aa14.6□□□□□ -0.07
AP4S1-207ENST00000555417 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
AP4S1-207ENST00000555417 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
AP4S1-207ENST00000555417 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
AP4S1-207ENST00000555417 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
AP4S1-207ENST00000555417 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
AP4S1-207ENST00000555417 CHD1O14646 1710 aa14.58□□□□□ -0.08
AP4S1-207ENST00000555417 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
AP4S1-207ENST00000555417 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
AP4S1-207ENST00000555417 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
AP4S1-207ENST00000555417 MYT1Q01538 1121 aa14.55□□□□□ -0.08
AP4S1-207ENST00000555417 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
AP4S1-207ENST00000555417 GRIN2BQ13224 1484 aa14.52□□□□□ -0.08
AP4S1-207ENST00000555417 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms