RNA–Protein interactions for RNA: ENST00000554961.5

PSMA6-209, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-209ENST00000554961 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
PSMA6-209ENST00000554961 ABCC9O60706 1549 aa20.03■□□□□ 0.8
PSMA6-209ENST00000554961 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
PSMA6-209ENST00000554961 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
PSMA6-209ENST00000554961 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
PSMA6-209ENST00000554961 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
PSMA6-209ENST00000554961 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
PSMA6-209ENST00000554961 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
PSMA6-209ENST00000554961 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.534e-6■□□□□ 9.3
PSMA6-209ENST00000554961 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
PSMA6-209ENST00000554961 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
PSMA6-209ENST00000554961 NACADO15069 1562 aa18.19■□□□□ 0.5
PSMA6-209ENST00000554961 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
PSMA6-209ENST00000554961 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
PSMA6-209ENST00000554961 CUX2O14529 1486 aa17.86■□□□□ 0.45
PSMA6-209ENST00000554961 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
PSMA6-209ENST00000554961 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
PSMA6-209ENST00000554961 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
PSMA6-209ENST00000554961 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
PSMA6-209ENST00000554961 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
PSMA6-209ENST00000554961 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
PSMA6-209ENST00000554961 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
PSMA6-209ENST00000554961 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
PSMA6-209ENST00000554961 DCAF1Q9Y4B6 1507 aa16.88■□□□□ 0.29
PSMA6-209ENST00000554961 NESP48681 1621 aa16.87■□□□□ 0.29
PSMA6-209ENST00000554961 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
PSMA6-209ENST00000554961 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
PSMA6-209ENST00000554961 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
PSMA6-209ENST00000554961 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
PSMA6-209ENST00000554961 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
PSMA6-209ENST00000554961 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
PSMA6-209ENST00000554961 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
PSMA6-209ENST00000554961 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
PSMA6-209ENST00000554961 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
PSMA6-209ENST00000554961 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
PSMA6-209ENST00000554961 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
PSMA6-209ENST00000554961 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
PSMA6-209ENST00000554961 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
PSMA6-209ENST00000554961 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
PSMA6-209ENST00000554961 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
PSMA6-209ENST00000554961 WDR62O43379 1518 aa16.53■□□□□ 0.24
PSMA6-209ENST00000554961 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
PSMA6-209ENST00000554961 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
PSMA6-209ENST00000554961 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
PSMA6-209ENST00000554961 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
PSMA6-209ENST00000554961 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
PSMA6-209ENST00000554961 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
PSMA6-209ENST00000554961 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
PSMA6-209ENST00000554961 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
PSMA6-209ENST00000554961 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
PSMA6-209ENST00000554961 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
PSMA6-209ENST00000554961 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
PSMA6-209ENST00000554961 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
PSMA6-209ENST00000554961 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
PSMA6-209ENST00000554961 CHD1O14646 1710 aa15.98■□□□□ 0.15
PSMA6-209ENST00000554961 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
PSMA6-209ENST00000554961 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
PSMA6-209ENST00000554961 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
PSMA6-209ENST00000554961 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
PSMA6-209ENST00000554961 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
PSMA6-209ENST00000554961 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
PSMA6-209ENST00000554961 CLASP1Q7Z460 1538 aa15.79■□□□□ 0.12
PSMA6-209ENST00000554961 CFTRP13569 1480 aa15.76■□□□□ 0.11
PSMA6-209ENST00000554961 LMTK3Q96Q04 1460 aa15.72■□□□□ 0.11
PSMA6-209ENST00000554961 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
PSMA6-209ENST00000554961 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
PSMA6-209ENST00000554961 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
PSMA6-209ENST00000554961 HECW2Q9P2P5 1572 aa15.69■□□□□ 0.1
PSMA6-209ENST00000554961 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
PSMA6-209ENST00000554961 FBLN2P98095 1184 aa15.63■□□□□ 0.09
PSMA6-209ENST00000554961 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
PSMA6-209ENST00000554961 SOCS7O14512 581 aa15.61■□□□□ 0.09
PSMA6-209ENST00000554961 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
PSMA6-209ENST00000554961 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.094e-6■■■■□ 25.5
PSMA6-209ENST00000554961 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
PSMA6-209ENST00000554961 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
PSMA6-209ENST00000554961 KDM6BO15054 1643 aa15.51■□□□□ 0.07
PSMA6-209ENST00000554961 WIZO95785 1651 aa15.48■□□□□ 0.07
PSMA6-209ENST00000554961 ADGRL1O94910 1474 aa15.46■□□□□ 0.07
PSMA6-209ENST00000554961 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
PSMA6-209ENST00000554961 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
PSMA6-209ENST00000554961 ILDR2Q71H61 639 aa15.44■□□□□ 0.06
PSMA6-209ENST00000554961 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
PSMA6-209ENST00000554961 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
PSMA6-209ENST00000554961 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
PSMA6-209ENST00000554961 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
PSMA6-209ENST00000554961 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
PSMA6-209ENST00000554961 FOXD1Q16676 465 aa15.36■□□□□ 0.05
PSMA6-209ENST00000554961 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
PSMA6-209ENST00000554961 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
PSMA6-209ENST00000554961 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
PSMA6-209ENST00000554961 DISP3Q9P2K9 1392 aa15.31■□□□□ 0.04
PSMA6-209ENST00000554961 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
PSMA6-209ENST00000554961 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
PSMA6-209ENST00000554961 MAPKBP1O60336 1514 aa15.27■□□□□ 0.04
PSMA6-209ENST00000554961 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
PSMA6-209ENST00000554961 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
PSMA6-209ENST00000554961 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
PSMA6-209ENST00000554961 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
PSMA6-209ENST00000554961 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms