RNA–Protein interactions for RNA: ENST00000553703.1

KLHDC2-204, Transcript of kelch domain containing 2, humanhuman

TSL 2

Gene KLHDC2, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-204ENST00000553703 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
KLHDC2-204ENST00000553703 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
KLHDC2-204ENST00000553703 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
KLHDC2-204ENST00000553703 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
KLHDC2-204ENST00000553703 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
KLHDC2-204ENST00000553703 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
KLHDC2-204ENST00000553703 ABCC9O60706 1549 aa17.57■□□□□ 0.4
KLHDC2-204ENST00000553703 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
KLHDC2-204ENST00000553703 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
KLHDC2-204ENST00000553703 FOXD1Q16676 465 aa16.91■□□□□ 0.3
KLHDC2-204ENST00000553703 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
KLHDC2-204ENST00000553703 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
KLHDC2-204ENST00000553703 NACADO15069 1562 aa16.55■□□□□ 0.24
KLHDC2-204ENST00000553703 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
KLHDC2-204ENST00000553703 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
KLHDC2-204ENST00000553703 MSH5O43196 834 aa16.41■□□□□ 0.22
KLHDC2-204ENST00000553703 ADRA2BP18089 450 aa16.36■□□□□ 0.21
KLHDC2-204ENST00000553703 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
KLHDC2-204ENST00000553703 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
KLHDC2-204ENST00000553703 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
KLHDC2-204ENST00000553703 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
KLHDC2-204ENST00000553703 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
KLHDC2-204ENST00000553703 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
KLHDC2-204ENST00000553703 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
KLHDC2-204ENST00000553703 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
KLHDC2-204ENST00000553703 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
KLHDC2-204ENST00000553703 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
KLHDC2-204ENST00000553703 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
KLHDC2-204ENST00000553703 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
KLHDC2-204ENST00000553703 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
KLHDC2-204ENST00000553703 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
KLHDC2-204ENST00000553703 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
KLHDC2-204ENST00000553703 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
KLHDC2-204ENST00000553703 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
KLHDC2-204ENST00000553703 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
KLHDC2-204ENST00000553703 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
KLHDC2-204ENST00000553703 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
KLHDC2-204ENST00000553703 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
KLHDC2-204ENST00000553703 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
KLHDC2-204ENST00000553703 CUX2O14529 1486 aa15.11■□□□□ 0.01
KLHDC2-204ENST00000553703 NESP48681 1621 aa15.06■□□□□ 0
KLHDC2-204ENST00000553703 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
KLHDC2-204ENST00000553703 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
KLHDC2-204ENST00000553703 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
KLHDC2-204ENST00000553703 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
KLHDC2-204ENST00000553703 KCNA4P22459 653 aa14.91□□□□□ -0.02
KLHDC2-204ENST00000553703 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
KLHDC2-204ENST00000553703 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
KLHDC2-204ENST00000553703 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
KLHDC2-204ENST00000553703 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
KLHDC2-204ENST00000553703 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
KLHDC2-204ENST00000553703 WIZO95785 1651 aa14.84□□□□□ -0.03
KLHDC2-204ENST00000553703 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
KLHDC2-204ENST00000553703 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
KLHDC2-204ENST00000553703 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
KLHDC2-204ENST00000553703 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
KLHDC2-204ENST00000553703 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
KLHDC2-204ENST00000553703 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
KLHDC2-204ENST00000553703 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
KLHDC2-204ENST00000553703 WDR62O43379 1518 aa14.66□□□□□ -0.06
KLHDC2-204ENST00000553703 CFTRP13569 1480 aa14.65□□□□□ -0.06
KLHDC2-204ENST00000553703 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
KLHDC2-204ENST00000553703 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
KLHDC2-204ENST00000553703 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
KLHDC2-204ENST00000553703 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
KLHDC2-204ENST00000553703 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
KLHDC2-204ENST00000553703 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
KLHDC2-204ENST00000553703 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
KLHDC2-204ENST00000553703 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
KLHDC2-204ENST00000553703 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
KLHDC2-204ENST00000553703 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
KLHDC2-204ENST00000553703 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
KLHDC2-204ENST00000553703 ZNF608Q9ULD9 1512 aaPredicted RBP14.37□□□□□ -0.11
KLHDC2-204ENST00000553703 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
KLHDC2-204ENST00000553703 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
KLHDC2-204ENST00000553703 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
KLHDC2-204ENST00000553703 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
KLHDC2-204ENST00000553703 FBLN2P98095 1184 aa14.28□□□□□ -0.12
KLHDC2-204ENST00000553703 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
KLHDC2-204ENST00000553703 EIF4G3O43432 1585 aaKnown RBP14.25□□□□□ -0.13
KLHDC2-204ENST00000553703 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
KLHDC2-204ENST00000553703 SOGA1O94964 1423 aa14.23□□□□□ -0.13
KLHDC2-204ENST00000553703 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
KLHDC2-204ENST00000553703 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
KLHDC2-204ENST00000553703 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
KLHDC2-204ENST00000553703 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
KLHDC2-204ENST00000553703 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
KLHDC2-204ENST00000553703 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
KLHDC2-204ENST00000553703 TARBP1Q13395 1621 aaKnown RBP14.21□□□□□ -0.13
KLHDC2-204ENST00000553703 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.14
KLHDC2-204ENST00000553703 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
KLHDC2-204ENST00000553703 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
KLHDC2-204ENST00000553703 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
KLHDC2-204ENST00000553703 CHD1O14646 1710 aa14.14□□□□□ -0.15
KLHDC2-204ENST00000553703 CUX1P39880 1505 aa14.12□□□□□ -0.15
KLHDC2-204ENST00000553703 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
KLHDC2-204ENST00000553703 POTEHQ6S545 545 aa14.09□□□□□ -0.15
KLHDC2-204ENST00000553703 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
KLHDC2-204ENST00000553703 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
KLHDC2-204ENST00000553703 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms