RNA–Protein interactions for RNA: ENST00000551856.1

AC089998.2-201, humanhuman

TSL 3 BASIC

Gene AC089998.2, Length 277 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.2-201ENST00000551856 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
AC089998.2-201ENST00000551856 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
AC089998.2-201ENST00000551856 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
AC089998.2-201ENST00000551856 PHF23Q9BUL5 403 aaPredicted RBP15.74■□□□□ 0.11
AC089998.2-201ENST00000551856 FOXD1Q16676 465 aa15.02■□□□□ -0
AC089998.2-201ENST00000551856 NISCHQ9Y2I1 1504 aa14.89□□□□□ -0.03
AC089998.2-201ENST00000551856 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
AC089998.2-201ENST00000551856 MSH5O43196 834 aa14.19□□□□□ -0.14
AC089998.2-201ENST00000551856 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
AC089998.2-201ENST00000551856 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
AC089998.2-201ENST00000551856 ADRA2BP18089 450 aa13.57□□□□□ -0.24
AC089998.2-201ENST00000551856 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
AC089998.2-201ENST00000551856 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
AC089998.2-201ENST00000551856 ABCC9O60706 1549 aa13.04□□□□□ -0.32
AC089998.2-201ENST00000551856 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
AC089998.2-201ENST00000551856 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
AC089998.2-201ENST00000551856 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
AC089998.2-201ENST00000551856 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
AC089998.2-201ENST00000551856 NACADO15069 1562 aa12.47□□□□□ -0.41
AC089998.2-201ENST00000551856 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
AC089998.2-201ENST00000551856 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
AC089998.2-201ENST00000551856 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
AC089998.2-201ENST00000551856 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
AC089998.2-201ENST00000551856 DCAF1Q9Y4B6 1507 aa12.29□□□□□ -0.44
AC089998.2-201ENST00000551856 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
AC089998.2-201ENST00000551856 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC089998.2-201ENST00000551856 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
AC089998.2-201ENST00000551856 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
AC089998.2-201ENST00000551856 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
AC089998.2-201ENST00000551856 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
AC089998.2-201ENST00000551856 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
AC089998.2-201ENST00000551856 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
AC089998.2-201ENST00000551856 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
AC089998.2-201ENST00000551856 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
AC089998.2-201ENST00000551856 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
AC089998.2-201ENST00000551856 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
AC089998.2-201ENST00000551856 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
AC089998.2-201ENST00000551856 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
AC089998.2-201ENST00000551856 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
AC089998.2-201ENST00000551856 CECR2Q9BXF3 1484 aa11.71□□□□□ -0.53
AC089998.2-201ENST00000551856 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
AC089998.2-201ENST00000551856 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
AC089998.2-201ENST00000551856 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
AC089998.2-201ENST00000551856 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
AC089998.2-201ENST00000551856 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
AC089998.2-201ENST00000551856 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
AC089998.2-201ENST00000551856 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
AC089998.2-201ENST00000551856 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
AC089998.2-201ENST00000551856 POTEHQ6S545 545 aa11.42□□□□□ -0.58
AC089998.2-201ENST00000551856 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
AC089998.2-201ENST00000551856 WIZO95785 1651 aa11.36□□□□□ -0.59
AC089998.2-201ENST00000551856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
AC089998.2-201ENST00000551856 RSF1Q96T23 1441 aaPredicted RBP11.34□□□□□ -0.59
AC089998.2-201ENST00000551856 NESP48681 1621 aa11.27□□□□□ -0.6
AC089998.2-201ENST00000551856 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
AC089998.2-201ENST00000551856 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
AC089998.2-201ENST00000551856 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
AC089998.2-201ENST00000551856 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
AC089998.2-201ENST00000551856 DSG3P32926 999 aa11.17□□□□□ -0.62
AC089998.2-201ENST00000551856 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
AC089998.2-201ENST00000551856 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
AC089998.2-201ENST00000551856 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
AC089998.2-201ENST00000551856 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
AC089998.2-201ENST00000551856 CUX2O14529 1486 aa11.12□□□□□ -0.63
AC089998.2-201ENST00000551856 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
AC089998.2-201ENST00000551856 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
AC089998.2-201ENST00000551856 CFTRP13569 1480 aa11.1□□□□□ -0.63
AC089998.2-201ENST00000551856 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
AC089998.2-201ENST00000551856 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
AC089998.2-201ENST00000551856 SUPT5HO00267 1087 aaKnown RBP11.06□□□□□ -0.64
AC089998.2-201ENST00000551856 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
AC089998.2-201ENST00000551856 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
AC089998.2-201ENST00000551856 CAPN15O75808 1086 aa11.04□□□□□ -0.64
AC089998.2-201ENST00000551856 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
AC089998.2-201ENST00000551856 PRDM2Q13029 1718 aa11.02□□□□□ -0.65
AC089998.2-201ENST00000551856 WDR62O43379 1518 aa10.99□□□□□ -0.65
AC089998.2-201ENST00000551856 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
AC089998.2-201ENST00000551856 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
AC089998.2-201ENST00000551856 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
AC089998.2-201ENST00000551856 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
AC089998.2-201ENST00000551856 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
AC089998.2-201ENST00000551856 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
AC089998.2-201ENST00000551856 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
AC089998.2-201ENST00000551856 CUX1P39880 1505 aa10.78□□□□□ -0.68
AC089998.2-201ENST00000551856 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
AC089998.2-201ENST00000551856 ABCB7O75027 752 aa10.76□□□□□ -0.69
AC089998.2-201ENST00000551856 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
AC089998.2-201ENST00000551856 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
AC089998.2-201ENST00000551856 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
AC089998.2-201ENST00000551856 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
AC089998.2-201ENST00000551856 TARBP1Q13395 1621 aaKnown RBP10.74□□□□□ -0.69
AC089998.2-201ENST00000551856 SOGA1O94964 1423 aa10.74□□□□□ -0.69
AC089998.2-201ENST00000551856 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
AC089998.2-201ENST00000551856 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
AC089998.2-201ENST00000551856 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
AC089998.2-201ENST00000551856 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
AC089998.2-201ENST00000551856 TDRD9Q8NDG6 1382 aaKnown RBP10.69□□□□□ -0.7
AC089998.2-201ENST00000551856 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
AC089998.2-201ENST00000551856 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
AC089998.2-201ENST00000551856 APLP2Q06481 763 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms