RNA–Protein interactions for RNA: ENST00000551627.1

TCHP-210, Transcript of trichoplein keratin filament binding, humanhuman

TSL 2

Gene TCHP, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-210ENST00000551627 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
TCHP-210ENST00000551627 ABCC9O60706 1549 aa25.59■■□□□ 1.69
TCHP-210ENST00000551627 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
TCHP-210ENST00000551627 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
TCHP-210ENST00000551627 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
TCHP-210ENST00000551627 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
TCHP-210ENST00000551627 NACADO15069 1562 aa23.52■■□□□ 1.36
TCHP-210ENST00000551627 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
TCHP-210ENST00000551627 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
TCHP-210ENST00000551627 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
TCHP-210ENST00000551627 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
TCHP-210ENST00000551627 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
TCHP-210ENST00000551627 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.28
TCHP-210ENST00000551627 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
TCHP-210ENST00000551627 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
TCHP-210ENST00000551627 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
TCHP-210ENST00000551627 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
TCHP-210ENST00000551627 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.19
TCHP-210ENST00000551627 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
TCHP-210ENST00000551627 CUX2O14529 1486 aa22.41■■□□□ 1.18
TCHP-210ENST00000551627 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
TCHP-210ENST00000551627 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
TCHP-210ENST00000551627 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
TCHP-210ENST00000551627 NESP48681 1621 aa21.74■■□□□ 1.07
TCHP-210ENST00000551627 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
TCHP-210ENST00000551627 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
TCHP-210ENST00000551627 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
TCHP-210ENST00000551627 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
TCHP-210ENST00000551627 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
TCHP-210ENST00000551627 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
TCHP-210ENST00000551627 SMARCA4P51532 1647 aa21.31■■□□□ 1
TCHP-210ENST00000551627 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TCHP-210ENST00000551627 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
TCHP-210ENST00000551627 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
TCHP-210ENST00000551627 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
TCHP-210ENST00000551627 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
TCHP-210ENST00000551627 WDR62O43379 1518 aa21.17■□□□□ 0.98
TCHP-210ENST00000551627 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
TCHP-210ENST00000551627 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
TCHP-210ENST00000551627 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
TCHP-210ENST00000551627 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
TCHP-210ENST00000551627 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
TCHP-210ENST00000551627 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
TCHP-210ENST00000551627 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
TCHP-210ENST00000551627 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
TCHP-210ENST00000551627 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
TCHP-210ENST00000551627 TRHP20396 242 aaPredicted RBP20.84■□□□□ 0.93
TCHP-210ENST00000551627 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
TCHP-210ENST00000551627 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
TCHP-210ENST00000551627 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
TCHP-210ENST00000551627 WIZO95785 1651 aa20.71■□□□□ 0.91
TCHP-210ENST00000551627 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
TCHP-210ENST00000551627 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
TCHP-210ENST00000551627 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
TCHP-210ENST00000551627 CFTRP13569 1480 aa20.61■□□□□ 0.89
TCHP-210ENST00000551627 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
TCHP-210ENST00000551627 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
TCHP-210ENST00000551627 CHD1O14646 1710 aa20.49■□□□□ 0.87
TCHP-210ENST00000551627 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
TCHP-210ENST00000551627 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
TCHP-210ENST00000551627 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
TCHP-210ENST00000551627 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
TCHP-210ENST00000551627 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.848e-7■■■■■ 28.7
TCHP-210ENST00000551627 FBLN2P98095 1184 aa20.3■□□□□ 0.84
TCHP-210ENST00000551627 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
TCHP-210ENST00000551627 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
TCHP-210ENST00000551627 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
TCHP-210ENST00000551627 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
TCHP-210ENST00000551627 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
TCHP-210ENST00000551627 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
TCHP-210ENST00000551627 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
TCHP-210ENST00000551627 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
TCHP-210ENST00000551627 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
TCHP-210ENST00000551627 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
TCHP-210ENST00000551627 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
TCHP-210ENST00000551627 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
TCHP-210ENST00000551627 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
TCHP-210ENST00000551627 MAGI1Q96QZ7 1491 aaPredicted RBP19.94■□□□□ 0.78
TCHP-210ENST00000551627 KIF13AQ9H1H9 1805 aa19.92■□□□□ 0.78
TCHP-210ENST00000551627 SOGA1O94964 1423 aa19.92■□□□□ 0.78
TCHP-210ENST00000551627 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
TCHP-210ENST00000551627 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
TCHP-210ENST00000551627 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
TCHP-210ENST00000551627 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
TCHP-210ENST00000551627 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
TCHP-210ENST00000551627 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
TCHP-210ENST00000551627 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
TCHP-210ENST00000551627 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
TCHP-210ENST00000551627 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
TCHP-210ENST00000551627 CUX1P39880 1505 aa19.64■□□□□ 0.73
TCHP-210ENST00000551627 KDM6BO15054 1643 aa19.63■□□□□ 0.73
TCHP-210ENST00000551627 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
TCHP-210ENST00000551627 ABCC10Q5T3U5 1492 aa19.63■□□□□ 0.73
TCHP-210ENST00000551627 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
TCHP-210ENST00000551627 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
TCHP-210ENST00000551627 NUP160Q12769 1436 aa19.59■□□□□ 0.73
TCHP-210ENST00000551627 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
TCHP-210ENST00000551627 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
TCHP-210ENST00000551627 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
TCHP-210ENST00000551627 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms