RNA–Protein interactions for RNA: ENST00000551459.5

RAB5B-209, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-209ENST00000551459 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
RAB5B-209ENST00000551459 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
RAB5B-209ENST00000551459 NISCHQ9Y2I1 1504 aa13.6□□□□□ -0.23
RAB5B-209ENST00000551459 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
RAB5B-209ENST00000551459 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
RAB5B-209ENST00000551459 FOXD1Q16676 465 aa12.65□□□□□ -0.38
RAB5B-209ENST00000551459 ABCC9O60706 1549 aa12.42□□□□□ -0.42
RAB5B-209ENST00000551459 CCDC180Q9P1Z9 1646 aa12.18□□□□□ -0.46
RAB5B-209ENST00000551459 POTEDQ86YR6 584 aa12□□□□□ -0.49
RAB5B-209ENST00000551459 MSH5O43196 834 aa11.93□□□□□ -0.5
RAB5B-209ENST00000551459 PLPPR3Q6T4P5 718 aa11.92□□□□□ -0.5
RAB5B-209ENST00000551459 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
RAB5B-209ENST00000551459 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-209ENST00000551459 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
RAB5B-209ENST00000551459 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
RAB5B-209ENST00000551459 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
RAB5B-209ENST00000551459 ADRA2BP18089 450 aa11.61□□□□□ -0.55
RAB5B-209ENST00000551459 NACADO15069 1562 aa11.6□□□□□ -0.55
RAB5B-209ENST00000551459 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
RAB5B-209ENST00000551459 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
RAB5B-209ENST00000551459 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
RAB5B-209ENST00000551459 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
RAB5B-209ENST00000551459 UNC13AQ9UPW8 1703 aa11.38□□□□□ -0.59
RAB5B-209ENST00000551459 KCNA4P22459 653 aa11.24□□□□□ -0.61
RAB5B-209ENST00000551459 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
RAB5B-209ENST00000551459 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
RAB5B-209ENST00000551459 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
RAB5B-209ENST00000551459 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
RAB5B-209ENST00000551459 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
RAB5B-209ENST00000551459 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
RAB5B-209ENST00000551459 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
RAB5B-209ENST00000551459 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
RAB5B-209ENST00000551459 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
RAB5B-209ENST00000551459 DNAJC5Q9H3Z4 198 aa10.96□□□□□ -0.65
RAB5B-209ENST00000551459 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
RAB5B-209ENST00000551459 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
RAB5B-209ENST00000551459 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
RAB5B-209ENST00000551459 CUX2O14529 1486 aa10.74□□□□□ -0.69
RAB5B-209ENST00000551459 ATAD2BQ9ULI0 1458 aa10.71□□□□□ -0.69
RAB5B-209ENST00000551459 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.69
RAB5B-209ENST00000551459 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
RAB5B-209ENST00000551459 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
RAB5B-209ENST00000551459 NESP48681 1621 aa10.63□□□□□ -0.71
RAB5B-209ENST00000551459 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-209ENST00000551459 SMARCA2P51531 1590 aa10.62□□□□□ -0.71
RAB5B-209ENST00000551459 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
RAB5B-209ENST00000551459 HMGXB3Q12766 1538 aa10.62□□□□□ -0.71
RAB5B-209ENST00000551459 SMARCA4P51532 1647 aa10.61□□□□□ -0.71
RAB5B-209ENST00000551459 BAZ1BQ9UIG0 1483 aaKnown RBP10.56□□□□□ -0.72
RAB5B-209ENST00000551459 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
RAB5B-209ENST00000551459 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-209ENST00000551459 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
RAB5B-209ENST00000551459 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
RAB5B-209ENST00000551459 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
RAB5B-209ENST00000551459 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
RAB5B-209ENST00000551459 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
RAB5B-209ENST00000551459 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
RAB5B-209ENST00000551459 CADPSQ9ULU8 1353 aa10.44□□□□□ -0.74
RAB5B-209ENST00000551459 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
RAB5B-209ENST00000551459 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.74
RAB5B-209ENST00000551459 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
RAB5B-209ENST00000551459 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
RAB5B-209ENST00000551459 CACNB1Q02641 598 aaPredicted RBP10.37□□□□□ -0.75
RAB5B-209ENST00000551459 WDR62O43379 1518 aa10.34□□□□□ -0.75
RAB5B-209ENST00000551459 ZBTB22O15209 634 aa10.33□□□□□ -0.76
RAB5B-209ENST00000551459 WIZO95785 1651 aa10.32□□□□□ -0.76
RAB5B-209ENST00000551459 DCAF8L1A6NGE4 600 aa10.3□□□□□ -0.76
RAB5B-209ENST00000551459 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
RAB5B-209ENST00000551459 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
RAB5B-209ENST00000551459 RSF1Q96T23 1441 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-209ENST00000551459 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
RAB5B-209ENST00000551459 CFTRP13569 1480 aa10.28□□□□□ -0.76
RAB5B-209ENST00000551459 HOXD11P31277 338 aaPredicted RBP10.23□□□□□ -0.77
RAB5B-209ENST00000551459 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
RAB5B-209ENST00000551459 TOP2AP11388 1531 aaKnown RBP10.18□□□□□ -0.78
RAB5B-209ENST00000551459 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
RAB5B-209ENST00000551459 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.78
RAB5B-209ENST00000551459 RNF39Q9H2S5 420 aa10.15□□□□□ -0.78
RAB5B-209ENST00000551459 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
RAB5B-209ENST00000551459 CCDC88BA6NC98 1476 aa10.12□□□□□ -0.79
RAB5B-209ENST00000551459 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
RAB5B-209ENST00000551459 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-209ENST00000551459 RIMBP3CA6NJZ7 1639 aa10.08□□□□□ -0.8
RAB5B-209ENST00000551459 RIMBP3BA6NNM3 1639 aa10.08□□□□□ -0.8
RAB5B-209ENST00000551459 RIMBP3Q9UFD9 1639 aa10.08□□□□□ -0.8
RAB5B-209ENST00000551459 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
RAB5B-209ENST00000551459 CYB5RLQ6IPT4 315 aa10.06□□□□□ -0.8
RAB5B-209ENST00000551459 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
RAB5B-209ENST00000551459 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAB5B-209ENST00000551459 ABCC8Q09428 1581 aa10.03□□□□□ -0.8
RAB5B-209ENST00000551459 SUPT5HO00267 1087 aaKnown RBP10.02□□□□□ -0.81
RAB5B-209ENST00000551459 PRDM2Q13029 1718 aa10□□□□□ -0.81
RAB5B-209ENST00000551459 FBLN2P98095 1184 aa10□□□□□ -0.81
RAB5B-209ENST00000551459 C1QBPQ07021 282 aaKnown RBP10□□□□□ -0.81
RAB5B-209ENST00000551459 EIF4G3O43432 1585 aaKnown RBP10□□□□□ -0.81
RAB5B-209ENST00000551459 DNMBPQ6XZF7 1577 aa10□□□□□ -0.81
RAB5B-209ENST00000551459 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
RAB5B-209ENST00000551459 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-209ENST00000551459 POLA1P09884 1462 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-209ENST00000551459 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms