RNA–Protein interactions for RNA: ENST00000551258.5

RPLP0-221, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 5

Gene RPLP0, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-221ENST00000551258 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
RPLP0-221ENST00000551258 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
RPLP0-221ENST00000551258 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
RPLP0-221ENST00000551258 ABCC9O60706 1549 aa21.58■■□□□ 1.04
RPLP0-221ENST00000551258 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
RPLP0-221ENST00000551258 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
RPLP0-221ENST00000551258 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
RPLP0-221ENST00000551258 NACADO15069 1562 aa20.55■□□□□ 0.88
RPLP0-221ENST00000551258 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
RPLP0-221ENST00000551258 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
RPLP0-221ENST00000551258 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
RPLP0-221ENST00000551258 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
RPLP0-221ENST00000551258 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
RPLP0-221ENST00000551258 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
RPLP0-221ENST00000551258 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
RPLP0-221ENST00000551258 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
RPLP0-221ENST00000551258 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
RPLP0-221ENST00000551258 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
RPLP0-221ENST00000551258 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
RPLP0-221ENST00000551258 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
RPLP0-221ENST00000551258 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
RPLP0-221ENST00000551258 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
RPLP0-221ENST00000551258 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
RPLP0-221ENST00000551258 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
RPLP0-221ENST00000551258 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
RPLP0-221ENST00000551258 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
RPLP0-221ENST00000551258 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
RPLP0-221ENST00000551258 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
RPLP0-221ENST00000551258 WIZO95785 1651 aa18.95■□□□□ 0.62
RPLP0-221ENST00000551258 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
RPLP0-221ENST00000551258 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
RPLP0-221ENST00000551258 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
RPLP0-221ENST00000551258 HMGXB3Q12766 1538 aa18.85■□□□□ 0.61
RPLP0-221ENST00000551258 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
RPLP0-221ENST00000551258 NESP48681 1621 aa18.68■□□□□ 0.58
RPLP0-221ENST00000551258 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
RPLP0-221ENST00000551258 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
RPLP0-221ENST00000551258 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
RPLP0-221ENST00000551258 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
RPLP0-221ENST00000551258 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
RPLP0-221ENST00000551258 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
RPLP0-221ENST00000551258 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
RPLP0-221ENST00000551258 CFTRP13569 1480 aa18.35■□□□□ 0.53
RPLP0-221ENST00000551258 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
RPLP0-221ENST00000551258 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
RPLP0-221ENST00000551258 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
RPLP0-221ENST00000551258 FOXD1Q16676 465 aa18.21■□□□□ 0.51
RPLP0-221ENST00000551258 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
RPLP0-221ENST00000551258 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
RPLP0-221ENST00000551258 CUX2O14529 1486 aa18.18■□□□□ 0.5
RPLP0-221ENST00000551258 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
RPLP0-221ENST00000551258 WDR62O43379 1518 aa18.09■□□□□ 0.49
RPLP0-221ENST00000551258 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
RPLP0-221ENST00000551258 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.46
RPLP0-221ENST00000551258 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
RPLP0-221ENST00000551258 CUX1P39880 1505 aa17.91■□□□□ 0.46
RPLP0-221ENST00000551258 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
RPLP0-221ENST00000551258 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
RPLP0-221ENST00000551258 SOGA1O94964 1423 aa17.85■□□□□ 0.45
RPLP0-221ENST00000551258 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
RPLP0-221ENST00000551258 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
RPLP0-221ENST00000551258 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
RPLP0-221ENST00000551258 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
RPLP0-221ENST00000551258 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
RPLP0-221ENST00000551258 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.442e-7■■■■■ 80.8
RPLP0-221ENST00000551258 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
RPLP0-221ENST00000551258 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
RPLP0-221ENST00000551258 FBLN2P98095 1184 aa17.72■□□□□ 0.43
RPLP0-221ENST00000551258 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
RPLP0-221ENST00000551258 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
RPLP0-221ENST00000551258 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
RPLP0-221ENST00000551258 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
RPLP0-221ENST00000551258 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
RPLP0-221ENST00000551258 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
RPLP0-221ENST00000551258 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
RPLP0-221ENST00000551258 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
RPLP0-221ENST00000551258 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
RPLP0-221ENST00000551258 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
RPLP0-221ENST00000551258 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
RPLP0-221ENST00000551258 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
RPLP0-221ENST00000551258 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
RPLP0-221ENST00000551258 CHD1O14646 1710 aa17.53■□□□□ 0.4
RPLP0-221ENST00000551258 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
RPLP0-221ENST00000551258 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
RPLP0-221ENST00000551258 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
RPLP0-221ENST00000551258 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
RPLP0-221ENST00000551258 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
RPLP0-221ENST00000551258 IGF1RP08069 1367 aa17.39■□□□□ 0.37
RPLP0-221ENST00000551258 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
RPLP0-221ENST00000551258 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
RPLP0-221ENST00000551258 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
RPLP0-221ENST00000551258 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
RPLP0-221ENST00000551258 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
RPLP0-221ENST00000551258 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
RPLP0-221ENST00000551258 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
RPLP0-221ENST00000551258 RIMBP3CA6NJZ7 1639 aa17.27■□□□□ 0.36
RPLP0-221ENST00000551258 RIMBP3BA6NNM3 1639 aa17.27■□□□□ 0.36
RPLP0-221ENST00000551258 RIMBP3Q9UFD9 1639 aa17.27■□□□□ 0.36
RPLP0-221ENST00000551258 CEP170Q5SW79 1584 aa17.27■□□□□ 0.35
RPLP0-221ENST00000551258 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms