RNA–Protein interactions for RNA: ENST00000550733.1

PCBP2-219, Transcript of poly(rC) binding protein 2, humanhuman

TSL 2

Gene PCBP2, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-219ENST00000550733 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
PCBP2-219ENST00000550733 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
PCBP2-219ENST00000550733 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
PCBP2-219ENST00000550733 ABCC9O60706 1549 aa19.27■□□□□ 0.68
PCBP2-219ENST00000550733 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
PCBP2-219ENST00000550733 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
PCBP2-219ENST00000550733 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
PCBP2-219ENST00000550733 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
PCBP2-219ENST00000550733 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
PCBP2-219ENST00000550733 NACADO15069 1562 aa18.21■□□□□ 0.51
PCBP2-219ENST00000550733 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
PCBP2-219ENST00000550733 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCBP2-219ENST00000550733 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
PCBP2-219ENST00000550733 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
PCBP2-219ENST00000550733 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
PCBP2-219ENST00000550733 FOXD1Q16676 465 aa17.68■□□□□ 0.42
PCBP2-219ENST00000550733 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
PCBP2-219ENST00000550733 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
PCBP2-219ENST00000550733 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
PCBP2-219ENST00000550733 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
PCBP2-219ENST00000550733 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
PCBP2-219ENST00000550733 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
PCBP2-219ENST00000550733 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
PCBP2-219ENST00000550733 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
PCBP2-219ENST00000550733 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
PCBP2-219ENST00000550733 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
PCBP2-219ENST00000550733 CUX2O14529 1486 aa16.77■□□□□ 0.28
PCBP2-219ENST00000550733 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
PCBP2-219ENST00000550733 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
PCBP2-219ENST00000550733 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
PCBP2-219ENST00000550733 MSH5O43196 834 aa16.64■□□□□ 0.25
PCBP2-219ENST00000550733 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
PCBP2-219ENST00000550733 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
PCBP2-219ENST00000550733 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
PCBP2-219ENST00000550733 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PCBP2-219ENST00000550733 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
PCBP2-219ENST00000550733 NESP48681 1621 aa16.48■□□□□ 0.23
PCBP2-219ENST00000550733 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
PCBP2-219ENST00000550733 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
PCBP2-219ENST00000550733 PIAS4Q8N2W9 510 aaPredicted RBP16.39■□□□□ 0.21
PCBP2-219ENST00000550733 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
PCBP2-219ENST00000550733 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
PCBP2-219ENST00000550733 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
PCBP2-219ENST00000550733 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
PCBP2-219ENST00000550733 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
PCBP2-219ENST00000550733 KIF21AQ7Z4S6 1674 aa16.21■□□□□ 0.18
PCBP2-219ENST00000550733 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
PCBP2-219ENST00000550733 WDR62O43379 1518 aa16.14■□□□□ 0.18
PCBP2-219ENST00000550733 ADRA2BP18089 450 aa16.14■□□□□ 0.17
PCBP2-219ENST00000550733 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
PCBP2-219ENST00000550733 WIZO95785 1651 aa16.11■□□□□ 0.17
PCBP2-219ENST00000550733 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
PCBP2-219ENST00000550733 FANCD2Q9BXW9 1451 aa16.08■□□□□ 0.16
PCBP2-219ENST00000550733 CFTRP13569 1480 aa16.07■□□□□ 0.16
PCBP2-219ENST00000550733 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
PCBP2-219ENST00000550733 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.15
PCBP2-219ENST00000550733 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
PCBP2-219ENST00000550733 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
PCBP2-219ENST00000550733 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
PCBP2-219ENST00000550733 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
PCBP2-219ENST00000550733 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
PCBP2-219ENST00000550733 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
PCBP2-219ENST00000550733 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
PCBP2-219ENST00000550733 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
PCBP2-219ENST00000550733 RIMBP3CA6NJZ7 1639 aa15.67■□□□□ 0.1
PCBP2-219ENST00000550733 RIMBP3BA6NNM3 1639 aa15.67■□□□□ 0.1
PCBP2-219ENST00000550733 RIMBP3Q9UFD9 1639 aa15.67■□□□□ 0.1
PCBP2-219ENST00000550733 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
PCBP2-219ENST00000550733 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
PCBP2-219ENST00000550733 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
PCBP2-219ENST00000550733 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.093e-25■■■■■ 28.3
PCBP2-219ENST00000550733 FBLN2P98095 1184 aa15.61■□□□□ 0.09
PCBP2-219ENST00000550733 EIF4G3O43432 1585 aaKnown RBP15.6■□□□□ 0.09
PCBP2-219ENST00000550733 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
PCBP2-219ENST00000550733 SOGA1O94964 1423 aa15.56■□□□□ 0.08
PCBP2-219ENST00000550733 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
PCBP2-219ENST00000550733 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
PCBP2-219ENST00000550733 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.08
PCBP2-219ENST00000550733 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
PCBP2-219ENST00000550733 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
PCBP2-219ENST00000550733 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
PCBP2-219ENST00000550733 CHD1O14646 1710 aa15.47■□□□□ 0.07
PCBP2-219ENST00000550733 ARAP1Q96P48 1450 aa15.46■□□□□ 0.06
PCBP2-219ENST00000550733 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
PCBP2-219ENST00000550733 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
PCBP2-219ENST00000550733 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
PCBP2-219ENST00000550733 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
PCBP2-219ENST00000550733 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
PCBP2-219ENST00000550733 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
PCBP2-219ENST00000550733 CUX1P39880 1505 aa15.37■□□□□ 0.05
PCBP2-219ENST00000550733 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
PCBP2-219ENST00000550733 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
PCBP2-219ENST00000550733 ABCA10Q8WWZ4 1543 aa15.29■□□□□ 0.04
PCBP2-219ENST00000550733 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
PCBP2-219ENST00000550733 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
PCBP2-219ENST00000550733 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
PCBP2-219ENST00000550733 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
PCBP2-219ENST00000550733 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
PCBP2-219ENST00000550733 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
PCBP2-219ENST00000550733 NUP160Q12769 1436 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms