RNA–Protein interactions for RNA: ENST00000550619.1

SART3-213, Transcript of squamous cell carcinoma antigen recognized by T cells 3, humanhuman

TSL 4

Gene SART3, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SART3-213ENST00000550619 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
SART3-213ENST00000550619 ABCC9O60706 1549 aa31.91■■■□□ 2.7
SART3-213ENST00000550619 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
SART3-213ENST00000550619 CCDC180Q9P1Z9 1646 aa30.5■■■□□ 2.47
SART3-213ENST00000550619 RB1CC1Q8TDY2 1594 aa29.7■■■□□ 2.35
SART3-213ENST00000550619 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.31
SART3-213ENST00000550619 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
SART3-213ENST00000550619 NACADO15069 1562 aa29.15■■■□□ 2.26
SART3-213ENST00000550619 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
SART3-213ENST00000550619 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
SART3-213ENST00000550619 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
SART3-213ENST00000550619 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
SART3-213ENST00000550619 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
SART3-213ENST00000550619 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.12
SART3-213ENST00000550619 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
SART3-213ENST00000550619 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
SART3-213ENST00000550619 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
SART3-213ENST00000550619 CUX2O14529 1486 aa27.98■■■□□ 2.07
SART3-213ENST00000550619 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
SART3-213ENST00000550619 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
SART3-213ENST00000550619 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
SART3-213ENST00000550619 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
SART3-213ENST00000550619 NESP48681 1621 aa27.04■■□□□ 1.92
SART3-213ENST00000550619 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
SART3-213ENST00000550619 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
SART3-213ENST00000550619 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
SART3-213ENST00000550619 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
SART3-213ENST00000550619 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
SART3-213ENST00000550619 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SART3-213ENST00000550619 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
SART3-213ENST00000550619 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
SART3-213ENST00000550619 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
SART3-213ENST00000550619 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
SART3-213ENST00000550619 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
SART3-213ENST00000550619 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
SART3-213ENST00000550619 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SART3-213ENST00000550619 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SART3-213ENST00000550619 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SART3-213ENST00000550619 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SART3-213ENST00000550619 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
SART3-213ENST00000550619 WDR62O43379 1518 aa26.3■■□□□ 1.8
SART3-213ENST00000550619 TRHP20396 242 aaPredicted RBP26.17■■□□□ 1.78
SART3-213ENST00000550619 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
SART3-213ENST00000550619 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
SART3-213ENST00000550619 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
SART3-213ENST00000550619 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
SART3-213ENST00000550619 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.74
SART3-213ENST00000550619 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
SART3-213ENST00000550619 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
SART3-213ENST00000550619 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
SART3-213ENST00000550619 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
SART3-213ENST00000550619 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
SART3-213ENST00000550619 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
SART3-213ENST00000550619 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
SART3-213ENST00000550619 WIZO95785 1651 aa25.62■■□□□ 1.69
SART3-213ENST00000550619 ILDR1Q86SU0 546 aaPredicted RBP25.51■■□□□ 1.67
SART3-213ENST00000550619 CFTRP13569 1480 aa25.48■■□□□ 1.67
SART3-213ENST00000550619 CHD1O14646 1710 aa25.48■■□□□ 1.67
SART3-213ENST00000550619 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
SART3-213ENST00000550619 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
SART3-213ENST00000550619 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
SART3-213ENST00000550619 FBLN2P98095 1184 aa25.33■■□□□ 1.65
SART3-213ENST00000550619 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.631e-6■■■■□ 21.8
SART3-213ENST00000550619 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
SART3-213ENST00000550619 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
SART3-213ENST00000550619 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
SART3-213ENST00000550619 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
SART3-213ENST00000550619 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
SART3-213ENST00000550619 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
SART3-213ENST00000550619 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
SART3-213ENST00000550619 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
SART3-213ENST00000550619 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
SART3-213ENST00000550619 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
SART3-213ENST00000550619 KDM4FA0A1W2PPD8 638 aa24.87■■□□□ 1.57
SART3-213ENST00000550619 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
SART3-213ENST00000550619 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
SART3-213ENST00000550619 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
SART3-213ENST00000550619 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
SART3-213ENST00000550619 KIF13AQ9H1H9 1805 aa24.78■■□□□ 1.56
SART3-213ENST00000550619 MAGI1Q96QZ7 1491 aaPredicted RBP24.73■■□□□ 1.55
SART3-213ENST00000550619 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
SART3-213ENST00000550619 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
SART3-213ENST00000550619 SOGA1O94964 1423 aa24.67■■□□□ 1.54
SART3-213ENST00000550619 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
SART3-213ENST00000550619 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
SART3-213ENST00000550619 KDM6BO15054 1643 aa24.51■■□□□ 1.51
SART3-213ENST00000550619 FAM69CQ0P6D2 419 aa24.51■■□□□ 1.51
SART3-213ENST00000550619 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
SART3-213ENST00000550619 HECW2Q9P2P5 1572 aa24.47■■□□□ 1.51
SART3-213ENST00000550619 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
SART3-213ENST00000550619 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
SART3-213ENST00000550619 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
SART3-213ENST00000550619 ABCC10Q5T3U5 1492 aa24.44■■□□□ 1.5
SART3-213ENST00000550619 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
SART3-213ENST00000550619 ADGRL1O94910 1474 aa24.36■■□□□ 1.49
SART3-213ENST00000550619 DIP2BQ9P265 1576 aa24.36■■□□□ 1.49
SART3-213ENST00000550619 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
SART3-213ENST00000550619 TSPOAP1O95153 1857 aa24.32■■□□□ 1.48
SART3-213ENST00000550619 SHROOM2Q13796 1616 aa24.31■■□□□ 1.48
SART3-213ENST00000550619 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms