RNA–Protein interactions for RNA: ENST00000549644.1

ERBB3-211, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 306 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-211ENST00000549644 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
ERBB3-211ENST00000549644 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
ERBB3-211ENST00000549644 ABCC9O60706 1549 aa18.77■□□□□ 0.6
ERBB3-211ENST00000549644 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
ERBB3-211ENST00000549644 NACADO15069 1562 aa18.08■□□□□ 0.48
ERBB3-211ENST00000549644 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
ERBB3-211ENST00000549644 DCAF8L2P0C7V8 631 aa17.85■□□□□ 0.45
ERBB3-211ENST00000549644 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
ERBB3-211ENST00000549644 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
ERBB3-211ENST00000549644 UNC13AQ9UPW8 1703 aa17.63■□□□□ 0.41
ERBB3-211ENST00000549644 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
ERBB3-211ENST00000549644 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
ERBB3-211ENST00000549644 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
ERBB3-211ENST00000549644 SCRIBQ14160 1630 aa17.34■□□□□ 0.37
ERBB3-211ENST00000549644 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
ERBB3-211ENST00000549644 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
ERBB3-211ENST00000549644 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
ERBB3-211ENST00000549644 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
ERBB3-211ENST00000549644 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
ERBB3-211ENST00000549644 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
ERBB3-211ENST00000549644 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
ERBB3-211ENST00000549644 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
ERBB3-211ENST00000549644 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
ERBB3-211ENST00000549644 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
ERBB3-211ENST00000549644 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
ERBB3-211ENST00000549644 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
ERBB3-211ENST00000549644 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
ERBB3-211ENST00000549644 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
ERBB3-211ENST00000549644 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
ERBB3-211ENST00000549644 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
ERBB3-211ENST00000549644 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
ERBB3-211ENST00000549644 WIZO95785 1651 aa16.24■□□□□ 0.19
ERBB3-211ENST00000549644 CUX2O14529 1486 aa16.22■□□□□ 0.19
ERBB3-211ENST00000549644 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
ERBB3-211ENST00000549644 NESP48681 1621 aa16.16■□□□□ 0.18
ERBB3-211ENST00000549644 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
ERBB3-211ENST00000549644 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
ERBB3-211ENST00000549644 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
ERBB3-211ENST00000549644 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
ERBB3-211ENST00000549644 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
ERBB3-211ENST00000549644 CFTRP13569 1480 aa16.01■□□□□ 0.15
ERBB3-211ENST00000549644 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
ERBB3-211ENST00000549644 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
ERBB3-211ENST00000549644 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
ERBB3-211ENST00000549644 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
ERBB3-211ENST00000549644 WDR62O43379 1518 aa15.91■□□□□ 0.14
ERBB3-211ENST00000549644 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
ERBB3-211ENST00000549644 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
ERBB3-211ENST00000549644 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
ERBB3-211ENST00000549644 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
ERBB3-211ENST00000549644 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
ERBB3-211ENST00000549644 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
ERBB3-211ENST00000549644 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
ERBB3-211ENST00000549644 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
ERBB3-211ENST00000549644 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
ERBB3-211ENST00000549644 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
ERBB3-211ENST00000549644 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
ERBB3-211ENST00000549644 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
ERBB3-211ENST00000549644 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
ERBB3-211ENST00000549644 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
ERBB3-211ENST00000549644 SOGA1O94964 1423 aa15.44■□□□□ 0.06
ERBB3-211ENST00000549644 CUX1P39880 1505 aa15.43■□□□□ 0.06
ERBB3-211ENST00000549644 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
ERBB3-211ENST00000549644 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.059e-7■■■■□ 22.7
ERBB3-211ENST00000549644 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
ERBB3-211ENST00000549644 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
ERBB3-211ENST00000549644 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
ERBB3-211ENST00000549644 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
ERBB3-211ENST00000549644 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
ERBB3-211ENST00000549644 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
ERBB3-211ENST00000549644 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
ERBB3-211ENST00000549644 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
ERBB3-211ENST00000549644 CHD1O14646 1710 aa15.29■□□□□ 0.04
ERBB3-211ENST00000549644 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
ERBB3-211ENST00000549644 ABCA5Q8WWZ7 1642 aa15.25■□□□□ 0.03
ERBB3-211ENST00000549644 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
ERBB3-211ENST00000549644 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
ERBB3-211ENST00000549644 FBLN2P98095 1184 aa15.24■□□□□ 0.03
ERBB3-211ENST00000549644 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
ERBB3-211ENST00000549644 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
ERBB3-211ENST00000549644 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
ERBB3-211ENST00000549644 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
ERBB3-211ENST00000549644 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
ERBB3-211ENST00000549644 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
ERBB3-211ENST00000549644 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
ERBB3-211ENST00000549644 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
ERBB3-211ENST00000549644 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
ERBB3-211ENST00000549644 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
ERBB3-211ENST00000549644 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
ERBB3-211ENST00000549644 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
ERBB3-211ENST00000549644 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
ERBB3-211ENST00000549644 NUP160Q12769 1436 aa15.04■□□□□ -0
ERBB3-211ENST00000549644 KIF27Q86VH2 1401 aa15.04■□□□□ -0
ERBB3-211ENST00000549644 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
ERBB3-211ENST00000549644 ARAP1Q96P48 1450 aa15.02■□□□□ -0
ERBB3-211ENST00000549644 CUL7Q14999 1698 aa15□□□□□ -0.01
ERBB3-211ENST00000549644 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
ERBB3-211ENST00000549644 SHROOM2Q13796 1616 aa14.96□□□□□ -0.01
ERBB3-211ENST00000549644 IGF1RP08069 1367 aa14.96□□□□□ -0.02
ERBB3-211ENST00000549644 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms