RNA–Protein interactions for RNA: ENST00000546503.1

TPCN1-205, Transcript of two pore segment channel 1, humanhuman

TSL 3

Gene TPCN1, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-205ENST00000546503 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
TPCN1-205ENST00000546503 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
TPCN1-205ENST00000546503 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
TPCN1-205ENST00000546503 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
TPCN1-205ENST00000546503 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
TPCN1-205ENST00000546503 FOXD1Q16676 465 aa14.29□□□□□ -0.12
TPCN1-205ENST00000546503 MSH5O43196 834 aa13.64□□□□□ -0.23
TPCN1-205ENST00000546503 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
TPCN1-205ENST00000546503 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
TPCN1-205ENST00000546503 ADRA2BP18089 450 aa12.79□□□□□ -0.36
TPCN1-205ENST00000546503 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
TPCN1-205ENST00000546503 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
TPCN1-205ENST00000546503 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
TPCN1-205ENST00000546503 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.5
TPCN1-205ENST00000546503 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
TPCN1-205ENST00000546503 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
TPCN1-205ENST00000546503 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
TPCN1-205ENST00000546503 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
TPCN1-205ENST00000546503 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
TPCN1-205ENST00000546503 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
TPCN1-205ENST00000546503 POTEHQ6S545 545 aa11.14□□□□□ -0.63
TPCN1-205ENST00000546503 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
TPCN1-205ENST00000546503 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
TPCN1-205ENST00000546503 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
TPCN1-205ENST00000546503 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
TPCN1-205ENST00000546503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPCN1-205ENST00000546503 DSG3P32926 999 aa10.62□□□□□ -0.71
TPCN1-205ENST00000546503 CAPN15O75808 1086 aa10.54□□□□□ -0.72
TPCN1-205ENST00000546503 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
TPCN1-205ENST00000546503 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
TPCN1-205ENST00000546503 CCDC180Q9P1Z9 1646 aa10.45□□□□□ -0.74
TPCN1-205ENST00000546503 NCBP3Q53F19 620 aaKnown RBP10.44□□□□□ -0.74
TPCN1-205ENST00000546503 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
TPCN1-205ENST00000546503 ABCB7O75027 752 aa10.25□□□□□ -0.77
TPCN1-205ENST00000546503 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
TPCN1-205ENST00000546503 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
TPCN1-205ENST00000546503 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
TPCN1-205ENST00000546503 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
TPCN1-205ENST00000546503 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
TPCN1-205ENST00000546503 APLP2Q06481 763 aa10.14□□□□□ -0.79
TPCN1-205ENST00000546503 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
TPCN1-205ENST00000546503 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
TPCN1-205ENST00000546503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
TPCN1-205ENST00000546503 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
TPCN1-205ENST00000546503 DCAF1Q9Y4B6 1507 aa9.95□□□□□ -0.82
TPCN1-205ENST00000546503 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
TPCN1-205ENST00000546503 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
TPCN1-205ENST00000546503 HAX1O00165 279 aa9.8□□□□□ -0.84
TPCN1-205ENST00000546503 MYO15BQ96JP2 1530 aa9.8□□□□□ -0.84
TPCN1-205ENST00000546503 POLA2Q14181 598 aa9.79□□□□□ -0.84
TPCN1-205ENST00000546503 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
TPCN1-205ENST00000546503 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
TPCN1-205ENST00000546503 ABCC9O60706 1549 aa9.64□□□□□ -0.87
TPCN1-205ENST00000546503 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
TPCN1-205ENST00000546503 NACADO15069 1562 aa9.63□□□□□ -0.87
TPCN1-205ENST00000546503 EVX2Q03828 476 aa9.61□□□□□ -0.87
TPCN1-205ENST00000546503 PITPNM1O00562 1244 aa9.6□□□□□ -0.87
TPCN1-205ENST00000546503 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
TPCN1-205ENST00000546503 MYCNP04198 464 aaPredicted RBP9.55□□□□□ -0.88
TPCN1-205ENST00000546503 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
TPCN1-205ENST00000546503 KCNA4P22459 653 aa9.52□□□□□ -0.89
TPCN1-205ENST00000546503 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
TPCN1-205ENST00000546503 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
TPCN1-205ENST00000546503 LHX8Q68G74 356 aa9.51□□□□□ -0.89
TPCN1-205ENST00000546503 UNC13AQ9UPW8 1703 aa9.5□□□□□ -0.89
TPCN1-205ENST00000546503 RB1CC1Q8TDY2 1594 aa9.48□□□□□ -0.89
TPCN1-205ENST00000546503 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
TPCN1-205ENST00000546503 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
TPCN1-205ENST00000546503 DCAF8L2P0C7V8 631 aa9.39□□□□□ -0.91
TPCN1-205ENST00000546503 GABBR2O75899 941 aa9.37□□□□□ -0.91
TPCN1-205ENST00000546503 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
TPCN1-205ENST00000546503 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
TPCN1-205ENST00000546503 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
TPCN1-205ENST00000546503 CECR2Q9BXF3 1484 aa9.29□□□□□ -0.92
TPCN1-205ENST00000546503 RSF1Q96T23 1441 aaPredicted RBP9.28□□□□□ -0.92
TPCN1-205ENST00000546503 MROH2BQ7Z745 1585 aa9.25□□□□□ -0.93
TPCN1-205ENST00000546503 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
TPCN1-205ENST00000546503 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
TPCN1-205ENST00000546503 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
TPCN1-205ENST00000546503 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
TPCN1-205ENST00000546503 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
TPCN1-205ENST00000546503 SMARCA4P51532 1647 aa9.2□□□□□ -0.94
TPCN1-205ENST00000546503 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
TPCN1-205ENST00000546503 WIZO95785 1651 aa9.18□□□□□ -0.94
TPCN1-205ENST00000546503 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
TPCN1-205ENST00000546503 EIF4G1Q04637 1599 aaKnown RBP9.16□□□□□ -0.94
TPCN1-205ENST00000546503 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
TPCN1-205ENST00000546503 PEG3Q9GZU2 1588 aa9.16□□□□□ -0.94
TPCN1-205ENST00000546503 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
TPCN1-205ENST00000546503 CHADLQ6NUI6 762 aa9.1□□□□□ -0.95
TPCN1-205ENST00000546503 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
TPCN1-205ENST00000546503 EHMT2Q96KQ7 1210 aa9.08□□□□□ -0.96
TPCN1-205ENST00000546503 TOP2AP11388 1531 aaKnown RBP9.08□□□□□ -0.96
TPCN1-205ENST00000546503 FBLN2P98095 1184 aa9.05□□□□□ -0.96
TPCN1-205ENST00000546503 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
TPCN1-205ENST00000546503 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
TPCN1-205ENST00000546503 CLCN6P51797 869 aa9.01□□□□□ -0.97
TPCN1-205ENST00000546503 PABPN1Q86U42 306 aaKnown RBP eCLIP9.01□□□□□ -0.97
TPCN1-205ENST00000546503 POTEMA6NI47 508 aa9□□□□□ -0.97
TPCN1-205ENST00000546503 DCBLD2Q96PD2 775 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms