RNA–Protein interactions for RNA: ENST00000545405.5

FADS1-220, Transcript of fatty acid desaturase 1, humanhuman

TSL 2

Gene FADS1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-220ENST00000545405 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
FADS1-220ENST00000545405 ABCC9O60706 1549 aa31.22■■■□□ 2.59
FADS1-220ENST00000545405 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
FADS1-220ENST00000545405 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
FADS1-220ENST00000545405 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
FADS1-220ENST00000545405 NACADO15069 1562 aa29.02■■■□□ 2.24
FADS1-220ENST00000545405 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
FADS1-220ENST00000545405 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
FADS1-220ENST00000545405 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
FADS1-220ENST00000545405 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
FADS1-220ENST00000545405 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
FADS1-220ENST00000545405 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
FADS1-220ENST00000545405 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
FADS1-220ENST00000545405 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
FADS1-220ENST00000545405 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
FADS1-220ENST00000545405 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
FADS1-220ENST00000545405 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
FADS1-220ENST00000545405 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
FADS1-220ENST00000545405 ZCCHC6Q5VYS8 1495 aaKnown RBP27.66■■■□□ 2.02
FADS1-220ENST00000545405 CUX2O14529 1486 aa27.22■■□□□ 1.95
FADS1-220ENST00000545405 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
FADS1-220ENST00000545405 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
FADS1-220ENST00000545405 NESP48681 1621 aa26.61■■□□□ 1.85
FADS1-220ENST00000545405 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
FADS1-220ENST00000545405 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
FADS1-220ENST00000545405 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
FADS1-220ENST00000545405 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
FADS1-220ENST00000545405 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
FADS1-220ENST00000545405 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
FADS1-220ENST00000545405 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
FADS1-220ENST00000545405 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.8
FADS1-220ENST00000545405 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
FADS1-220ENST00000545405 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
FADS1-220ENST00000545405 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
FADS1-220ENST00000545405 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
FADS1-220ENST00000545405 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
FADS1-220ENST00000545405 WDR62O43379 1518 aa25.96■■□□□ 1.75
FADS1-220ENST00000545405 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
FADS1-220ENST00000545405 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
FADS1-220ENST00000545405 OSCARQ8IYS5 282 aa25.86■■□□□ 1.73
FADS1-220ENST00000545405 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
FADS1-220ENST00000545405 RIMBP3CA6NJZ7 1639 aa25.65■■□□□ 1.7
FADS1-220ENST00000545405 RIMBP3BA6NNM3 1639 aa25.65■■□□□ 1.7
FADS1-220ENST00000545405 RIMBP3Q9UFD9 1639 aa25.65■■□□□ 1.7
FADS1-220ENST00000545405 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
FADS1-220ENST00000545405 WIZO95785 1651 aa25.59■■□□□ 1.69
FADS1-220ENST00000545405 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
FADS1-220ENST00000545405 CFTRP13569 1480 aa25.46■■□□□ 1.67
FADS1-220ENST00000545405 ARHGEF11O15085 1522 aa25.45■■□□□ 1.66
FADS1-220ENST00000545405 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
FADS1-220ENST00000545405 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
FADS1-220ENST00000545405 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
FADS1-220ENST00000545405 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
FADS1-220ENST00000545405 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
FADS1-220ENST00000545405 CHD1O14646 1710 aa25.17■■□□□ 1.62
FADS1-220ENST00000545405 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
FADS1-220ENST00000545405 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
FADS1-220ENST00000545405 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
FADS1-220ENST00000545405 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
FADS1-220ENST00000545405 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
FADS1-220ENST00000545405 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
FADS1-220ENST00000545405 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
FADS1-220ENST00000545405 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.596e-9■■■■■ 30
FADS1-220ENST00000545405 FBLN2P98095 1184 aa24.96■■□□□ 1.59
FADS1-220ENST00000545405 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
FADS1-220ENST00000545405 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
FADS1-220ENST00000545405 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
FADS1-220ENST00000545405 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
FADS1-220ENST00000545405 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
FADS1-220ENST00000545405 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
FADS1-220ENST00000545405 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
FADS1-220ENST00000545405 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
FADS1-220ENST00000545405 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
FADS1-220ENST00000545405 SOGA1O94964 1423 aa24.64■■□□□ 1.54
FADS1-220ENST00000545405 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
FADS1-220ENST00000545405 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
FADS1-220ENST00000545405 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
FADS1-220ENST00000545405 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
FADS1-220ENST00000545405 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
FADS1-220ENST00000545405 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
FADS1-220ENST00000545405 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
FADS1-220ENST00000545405 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
FADS1-220ENST00000545405 CUX1P39880 1505 aa24.35■■□□□ 1.49
FADS1-220ENST00000545405 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
FADS1-220ENST00000545405 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.49
FADS1-220ENST00000545405 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
FADS1-220ENST00000545405 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
FADS1-220ENST00000545405 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
FADS1-220ENST00000545405 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
FADS1-220ENST00000545405 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
FADS1-220ENST00000545405 NUP160Q12769 1436 aa24.12■■□□□ 1.45
FADS1-220ENST00000545405 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
FADS1-220ENST00000545405 ILDR1Q86SU0 546 aaPredicted RBP24.09■■□□□ 1.45
FADS1-220ENST00000545405 KDM4FA0A1W2PPD8 638 aa24.02■■□□□ 1.44
FADS1-220ENST00000545405 FAM69CQ0P6D2 419 aa24.02■■□□□ 1.44
FADS1-220ENST00000545405 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
FADS1-220ENST00000545405 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
FADS1-220ENST00000545405 KDM6BO15054 1643 aa23.97■■□□□ 1.43
FADS1-220ENST00000545405 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
FADS1-220ENST00000545405 DIP2BQ9P265 1576 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms