RNA–Protein interactions for RNA: ENST00000539652.1

AC078927.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC078927.1, Length 984 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078927.1-201ENST00000539652 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
AC078927.1-201ENST00000539652 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
AC078927.1-201ENST00000539652 ABCC9O60706 1549 aa22.67■■□□□ 1.22
AC078927.1-201ENST00000539652 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
AC078927.1-201ENST00000539652 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
AC078927.1-201ENST00000539652 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
AC078927.1-201ENST00000539652 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
AC078927.1-201ENST00000539652 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
AC078927.1-201ENST00000539652 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
AC078927.1-201ENST00000539652 NACADO15069 1562 aa21■□□□□ 0.95
AC078927.1-201ENST00000539652 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
AC078927.1-201ENST00000539652 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
AC078927.1-201ENST00000539652 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
AC078927.1-201ENST00000539652 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
AC078927.1-201ENST00000539652 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
AC078927.1-201ENST00000539652 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
AC078927.1-201ENST00000539652 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
AC078927.1-201ENST00000539652 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
AC078927.1-201ENST00000539652 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
AC078927.1-201ENST00000539652 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
AC078927.1-201ENST00000539652 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
AC078927.1-201ENST00000539652 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
AC078927.1-201ENST00000539652 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
AC078927.1-201ENST00000539652 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
AC078927.1-201ENST00000539652 CUX2O14529 1486 aa19.54■□□□□ 0.72
AC078927.1-201ENST00000539652 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
AC078927.1-201ENST00000539652 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
AC078927.1-201ENST00000539652 NESP48681 1621 aa19.37■□□□□ 0.69
AC078927.1-201ENST00000539652 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
AC078927.1-201ENST00000539652 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
AC078927.1-201ENST00000539652 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
AC078927.1-201ENST00000539652 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
AC078927.1-201ENST00000539652 FOXD1Q16676 465 aa19.22■□□□□ 0.67
AC078927.1-201ENST00000539652 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
AC078927.1-201ENST00000539652 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
AC078927.1-201ENST00000539652 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
AC078927.1-201ENST00000539652 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
AC078927.1-201ENST00000539652 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
AC078927.1-201ENST00000539652 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
AC078927.1-201ENST00000539652 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
AC078927.1-201ENST00000539652 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
AC078927.1-201ENST00000539652 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
AC078927.1-201ENST00000539652 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
AC078927.1-201ENST00000539652 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
AC078927.1-201ENST00000539652 WDR62O43379 1518 aa18.79■□□□□ 0.6
AC078927.1-201ENST00000539652 WIZO95785 1651 aa18.76■□□□□ 0.59
AC078927.1-201ENST00000539652 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
AC078927.1-201ENST00000539652 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
AC078927.1-201ENST00000539652 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
AC078927.1-201ENST00000539652 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
AC078927.1-201ENST00000539652 CFTRP13569 1480 aa18.51■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
AC078927.1-201ENST00000539652 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
AC078927.1-201ENST00000539652 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
AC078927.1-201ENST00000539652 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
AC078927.1-201ENST00000539652 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
AC078927.1-201ENST00000539652 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
AC078927.1-201ENST00000539652 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
AC078927.1-201ENST00000539652 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
AC078927.1-201ENST00000539652 MSH5O43196 834 aa18.26■□□□□ 0.51
AC078927.1-201ENST00000539652 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
AC078927.1-201ENST00000539652 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
AC078927.1-201ENST00000539652 CHD1O14646 1710 aa18.25■□□□□ 0.51
AC078927.1-201ENST00000539652 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
AC078927.1-201ENST00000539652 FBLN2P98095 1184 aa18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
AC078927.1-201ENST00000539652 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
AC078927.1-201ENST00000539652 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
AC078927.1-201ENST00000539652 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
AC078927.1-201ENST00000539652 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
AC078927.1-201ENST00000539652 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
AC078927.1-201ENST00000539652 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
AC078927.1-201ENST00000539652 SOGA1O94964 1423 aa17.95■□□□□ 0.46
AC078927.1-201ENST00000539652 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
AC078927.1-201ENST00000539652 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
AC078927.1-201ENST00000539652 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
AC078927.1-201ENST00000539652 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
AC078927.1-201ENST00000539652 CUX1P39880 1505 aa17.83■□□□□ 0.45
AC078927.1-201ENST00000539652 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
AC078927.1-201ENST00000539652 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
AC078927.1-201ENST00000539652 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
AC078927.1-201ENST00000539652 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
AC078927.1-201ENST00000539652 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
AC078927.1-201ENST00000539652 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
AC078927.1-201ENST00000539652 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
AC078927.1-201ENST00000539652 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
AC078927.1-201ENST00000539652 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
AC078927.1-201ENST00000539652 NUP160Q12769 1436 aa17.53■□□□□ 0.4
AC078927.1-201ENST00000539652 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms