RNA–Protein interactions for RNA: ENST00000539419.5

FADS1-212, Transcript of fatty acid desaturase 1, humanhuman

TSL 4

Gene FADS1, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-212ENST00000539419 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
FADS1-212ENST00000539419 ABCC9O60706 1549 aa27.29■■□□□ 1.96
FADS1-212ENST00000539419 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
FADS1-212ENST00000539419 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
FADS1-212ENST00000539419 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
FADS1-212ENST00000539419 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
FADS1-212ENST00000539419 NACADO15069 1562 aa25.02■■□□□ 1.6
FADS1-212ENST00000539419 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
FADS1-212ENST00000539419 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
FADS1-212ENST00000539419 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
FADS1-212ENST00000539419 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
FADS1-212ENST00000539419 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
FADS1-212ENST00000539419 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
FADS1-212ENST00000539419 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
FADS1-212ENST00000539419 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
FADS1-212ENST00000539419 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
FADS1-212ENST00000539419 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
FADS1-212ENST00000539419 CUX2O14529 1486 aa23.77■■□□□ 1.4
FADS1-212ENST00000539419 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
FADS1-212ENST00000539419 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
FADS1-212ENST00000539419 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
FADS1-212ENST00000539419 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
FADS1-212ENST00000539419 NESP48681 1621 aa23.18■■□□□ 1.3
FADS1-212ENST00000539419 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
FADS1-212ENST00000539419 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
FADS1-212ENST00000539419 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
FADS1-212ENST00000539419 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
FADS1-212ENST00000539419 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
FADS1-212ENST00000539419 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
FADS1-212ENST00000539419 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
FADS1-212ENST00000539419 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
FADS1-212ENST00000539419 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
FADS1-212ENST00000539419 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
FADS1-212ENST00000539419 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
FADS1-212ENST00000539419 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
FADS1-212ENST00000539419 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
FADS1-212ENST00000539419 WDR62O43379 1518 aa22.52■■□□□ 1.19
FADS1-212ENST00000539419 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
FADS1-212ENST00000539419 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
FADS1-212ENST00000539419 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
FADS1-212ENST00000539419 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
FADS1-212ENST00000539419 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
FADS1-212ENST00000539419 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
FADS1-212ENST00000539419 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
FADS1-212ENST00000539419 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
FADS1-212ENST00000539419 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
FADS1-212ENST00000539419 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
FADS1-212ENST00000539419 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
FADS1-212ENST00000539419 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
FADS1-212ENST00000539419 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
FADS1-212ENST00000539419 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
FADS1-212ENST00000539419 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
FADS1-212ENST00000539419 WIZO95785 1651 aa21.96■■□□□ 1.11
FADS1-212ENST00000539419 CFTRP13569 1480 aa21.96■■□□□ 1.11
FADS1-212ENST00000539419 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
FADS1-212ENST00000539419 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
FADS1-212ENST00000539419 CHD1O14646 1710 aa21.78■■□□□ 1.08
FADS1-212ENST00000539419 FBLN2P98095 1184 aa21.78■■□□□ 1.08
FADS1-212ENST00000539419 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
FADS1-212ENST00000539419 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
FADS1-212ENST00000539419 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.066e-9■■■■■ 31
FADS1-212ENST00000539419 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
FADS1-212ENST00000539419 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
FADS1-212ENST00000539419 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
FADS1-212ENST00000539419 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
FADS1-212ENST00000539419 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
FADS1-212ENST00000539419 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
FADS1-212ENST00000539419 ILDR1Q86SU0 546 aaPredicted RBP21.45■■□□□ 1.02
FADS1-212ENST00000539419 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
FADS1-212ENST00000539419 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
FADS1-212ENST00000539419 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
FADS1-212ENST00000539419 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
FADS1-212ENST00000539419 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
FADS1-212ENST00000539419 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
FADS1-212ENST00000539419 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
FADS1-212ENST00000539419 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
FADS1-212ENST00000539419 SOGA1O94964 1423 aa21.29■■□□□ 1
FADS1-212ENST00000539419 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
FADS1-212ENST00000539419 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
FADS1-212ENST00000539419 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
FADS1-212ENST00000539419 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
FADS1-212ENST00000539419 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
FADS1-212ENST00000539419 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
FADS1-212ENST00000539419 KDM4FA0A1W2PPD8 638 aa21.12■□□□□ 0.97
FADS1-212ENST00000539419 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
FADS1-212ENST00000539419 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
FADS1-212ENST00000539419 CEP170Q5SW79 1584 aa21■□□□□ 0.95
FADS1-212ENST00000539419 CUX1P39880 1505 aa20.99■□□□□ 0.95
FADS1-212ENST00000539419 FAM69CQ0P6D2 419 aa20.98■□□□□ 0.95
FADS1-212ENST00000539419 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
FADS1-212ENST00000539419 KDM6BO15054 1643 aa20.89■□□□□ 0.93
FADS1-212ENST00000539419 ABCC10Q5T3U5 1492 aa20.88■□□□□ 0.93
FADS1-212ENST00000539419 NUP160Q12769 1436 aa20.87■□□□□ 0.93
FADS1-212ENST00000539419 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
FADS1-212ENST00000539419 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
FADS1-212ENST00000539419 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
FADS1-212ENST00000539419 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
FADS1-212ENST00000539419 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
FADS1-212ENST00000539419 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
FADS1-212ENST00000539419 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms