RNA–Protein interactions for RNA: ENST00000538263.5

CYB561A3-211, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-211ENST00000538263 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
CYB561A3-211ENST00000538263 ABCC9O60706 1549 aa26.79■■□□□ 1.88
CYB561A3-211ENST00000538263 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
CYB561A3-211ENST00000538263 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
CYB561A3-211ENST00000538263 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
CYB561A3-211ENST00000538263 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
CYB561A3-211ENST00000538263 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
CYB561A3-211ENST00000538263 NACADO15069 1562 aa24.77■■□□□ 1.56
CYB561A3-211ENST00000538263 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
CYB561A3-211ENST00000538263 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
CYB561A3-211ENST00000538263 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
CYB561A3-211ENST00000538263 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
CYB561A3-211ENST00000538263 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.46
CYB561A3-211ENST00000538263 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
CYB561A3-211ENST00000538263 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
CYB561A3-211ENST00000538263 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
CYB561A3-211ENST00000538263 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
CYB561A3-211ENST00000538263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
CYB561A3-211ENST00000538263 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.37
CYB561A3-211ENST00000538263 CUX2O14529 1486 aa23.26■■□□□ 1.31
CYB561A3-211ENST00000538263 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
CYB561A3-211ENST00000538263 NESP48681 1621 aa22.88■■□□□ 1.25
CYB561A3-211ENST00000538263 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
CYB561A3-211ENST00000538263 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
CYB561A3-211ENST00000538263 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
CYB561A3-211ENST00000538263 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
CYB561A3-211ENST00000538263 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
CYB561A3-211ENST00000538263 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
CYB561A3-211ENST00000538263 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
CYB561A3-211ENST00000538263 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
CYB561A3-211ENST00000538263 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
CYB561A3-211ENST00000538263 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
CYB561A3-211ENST00000538263 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
CYB561A3-211ENST00000538263 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
CYB561A3-211ENST00000538263 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
CYB561A3-211ENST00000538263 WDR62O43379 1518 aa22.24■■□□□ 1.15
CYB561A3-211ENST00000538263 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
CYB561A3-211ENST00000538263 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
CYB561A3-211ENST00000538263 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
CYB561A3-211ENST00000538263 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
CYB561A3-211ENST00000538263 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
CYB561A3-211ENST00000538263 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
CYB561A3-211ENST00000538263 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
CYB561A3-211ENST00000538263 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
CYB561A3-211ENST00000538263 WIZO95785 1651 aa21.96■■□□□ 1.11
CYB561A3-211ENST00000538263 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
CYB561A3-211ENST00000538263 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
CYB561A3-211ENST00000538263 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
CYB561A3-211ENST00000538263 CFTRP13569 1480 aa21.77■■□□□ 1.08
CYB561A3-211ENST00000538263 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
CYB561A3-211ENST00000538263 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
CYB561A3-211ENST00000538263 CYB5RLQ6IPT4 315 aa21.62■■□□□ 1.05
CYB561A3-211ENST00000538263 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
CYB561A3-211ENST00000538263 CHD1O14646 1710 aa21.59■■□□□ 1.05
CYB561A3-211ENST00000538263 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
CYB561A3-211ENST00000538263 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
CYB561A3-211ENST00000538263 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
CYB561A3-211ENST00000538263 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
CYB561A3-211ENST00000538263 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
CYB561A3-211ENST00000538263 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
CYB561A3-211ENST00000538263 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.02
CYB561A3-211ENST00000538263 TARBP1Q13395 1621 aaKnown RBP21.38■■□□□ 1.01
CYB561A3-211ENST00000538263 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
CYB561A3-211ENST00000538263 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
CYB561A3-211ENST00000538263 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
CYB561A3-211ENST00000538263 FBLN2P98095 1184 aa21.29■■□□□ 1
CYB561A3-211ENST00000538263 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
CYB561A3-211ENST00000538263 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
CYB561A3-211ENST00000538263 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
CYB561A3-211ENST00000538263 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
CYB561A3-211ENST00000538263 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
CYB561A3-211ENST00000538263 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
CYB561A3-211ENST00000538263 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
CYB561A3-211ENST00000538263 SOGA1O94964 1423 aa21.04■□□□□ 0.96
CYB561A3-211ENST00000538263 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
CYB561A3-211ENST00000538263 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
CYB561A3-211ENST00000538263 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
CYB561A3-211ENST00000538263 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
CYB561A3-211ENST00000538263 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
CYB561A3-211ENST00000538263 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
CYB561A3-211ENST00000538263 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
CYB561A3-211ENST00000538263 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
CYB561A3-211ENST00000538263 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
CYB561A3-211ENST00000538263 CUX1P39880 1505 aa20.9■□□□□ 0.94
CYB561A3-211ENST00000538263 KIF13AQ9H1H9 1805 aa20.89■□□□□ 0.93
CYB561A3-211ENST00000538263 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
CYB561A3-211ENST00000538263 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
CYB561A3-211ENST00000538263 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
CYB561A3-211ENST00000538263 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
CYB561A3-211ENST00000538263 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
CYB561A3-211ENST00000538263 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
CYB561A3-211ENST00000538263 NUP160Q12769 1436 aa20.65■□□□□ 0.9
CYB561A3-211ENST00000538263 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
CYB561A3-211ENST00000538263 KDM4FA0A1W2PPD8 638 aa20.6■□□□□ 0.89
CYB561A3-211ENST00000538263 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
CYB561A3-211ENST00000538263 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
CYB561A3-211ENST00000538263 TSPOAP1O95153 1857 aa20.51■□□□□ 0.87
CYB561A3-211ENST00000538263 KDM6BO15054 1643 aa20.5■□□□□ 0.87
CYB561A3-211ENST00000538263 FAM69CQ0P6D2 419 aa20.5■□□□□ 0.87
CYB561A3-211ENST00000538263 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms