RNA–Protein interactions for RNA: ENST00000537297.2

USP15-204, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-204ENST00000537297 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
USP15-204ENST00000537297 CHIC1Q5VXU3 224 aa28.68■■■□□ 2.18
USP15-204ENST00000537297 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
USP15-204ENST00000537297 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
USP15-204ENST00000537297 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
USP15-204ENST00000537297 ABCC9O60706 1549 aa24.2■■□□□ 1.47
USP15-204ENST00000537297 FOXD1Q16676 465 aa23.65■■□□□ 1.38
USP15-204ENST00000537297 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
USP15-204ENST00000537297 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
USP15-204ENST00000537297 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
USP15-204ENST00000537297 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
USP15-204ENST00000537297 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
USP15-204ENST00000537297 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
USP15-204ENST00000537297 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
USP15-204ENST00000537297 NACADO15069 1562 aa22.35■■□□□ 1.17
USP15-204ENST00000537297 ADRA2BP18089 450 aa22.34■■□□□ 1.17
USP15-204ENST00000537297 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
USP15-204ENST00000537297 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
USP15-204ENST00000537297 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
USP15-204ENST00000537297 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
USP15-204ENST00000537297 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
USP15-204ENST00000537297 MSH5O43196 834 aa21.94■■□□□ 1.1
USP15-204ENST00000537297 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
USP15-204ENST00000537297 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
USP15-204ENST00000537297 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
USP15-204ENST00000537297 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
USP15-204ENST00000537297 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
USP15-204ENST00000537297 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
USP15-204ENST00000537297 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
USP15-204ENST00000537297 CUX2O14529 1486 aa21.1■□□□□ 0.97
USP15-204ENST00000537297 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
USP15-204ENST00000537297 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
USP15-204ENST00000537297 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
USP15-204ENST00000537297 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
USP15-204ENST00000537297 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
USP15-204ENST00000537297 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
USP15-204ENST00000537297 NESP48681 1621 aa20.6■□□□□ 0.89
USP15-204ENST00000537297 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
USP15-204ENST00000537297 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
USP15-204ENST00000537297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
USP15-204ENST00000537297 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
USP15-204ENST00000537297 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
USP15-204ENST00000537297 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
USP15-204ENST00000537297 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
USP15-204ENST00000537297 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
USP15-204ENST00000537297 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
USP15-204ENST00000537297 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
USP15-204ENST00000537297 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
USP15-204ENST00000537297 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
USP15-204ENST00000537297 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
USP15-204ENST00000537297 WIZO95785 1651 aa20.19■□□□□ 0.82
USP15-204ENST00000537297 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
USP15-204ENST00000537297 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
USP15-204ENST00000537297 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
USP15-204ENST00000537297 WDR62O43379 1518 aa20.04■□□□□ 0.8
USP15-204ENST00000537297 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
USP15-204ENST00000537297 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
USP15-204ENST00000537297 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
USP15-204ENST00000537297 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
USP15-204ENST00000537297 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
USP15-204ENST00000537297 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
USP15-204ENST00000537297 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
USP15-204ENST00000537297 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
USP15-204ENST00000537297 CFTRP13569 1480 aa19.8■□□□□ 0.76
USP15-204ENST00000537297 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
USP15-204ENST00000537297 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
USP15-204ENST00000537297 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
USP15-204ENST00000537297 CCDC88BA6NC98 1476 aa19.68■□□□□ 0.74
USP15-204ENST00000537297 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
USP15-204ENST00000537297 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
USP15-204ENST00000537297 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
USP15-204ENST00000537297 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
USP15-204ENST00000537297 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
USP15-204ENST00000537297 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
USP15-204ENST00000537297 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
USP15-204ENST00000537297 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
USP15-204ENST00000537297 TOPBP1Q92547 1522 aa19.48■□□□□ 0.71
USP15-204ENST00000537297 CHD1O14646 1710 aa19.45■□□□□ 0.7
USP15-204ENST00000537297 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
USP15-204ENST00000537297 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
USP15-204ENST00000537297 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
USP15-204ENST00000537297 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
USP15-204ENST00000537297 DCAF8L1A6NGE4 600 aa19.32■□□□□ 0.68
USP15-204ENST00000537297 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.683e-8■■■■□ 22.4
USP15-204ENST00000537297 NPM3O75607 178 aaKnown RBP19.31■□□□□ 0.68
USP15-204ENST00000537297 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
USP15-204ENST00000537297 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
USP15-204ENST00000537297 FBLN2P98095 1184 aa19.28■□□□□ 0.68
USP15-204ENST00000537297 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
USP15-204ENST00000537297 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
USP15-204ENST00000537297 KCNA4P22459 653 aa19.26■□□□□ 0.67
USP15-204ENST00000537297 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
USP15-204ENST00000537297 SOGA1O94964 1423 aa19.21■□□□□ 0.67
USP15-204ENST00000537297 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
USP15-204ENST00000537297 CUX1P39880 1505 aa19.18■□□□□ 0.66
USP15-204ENST00000537297 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
USP15-204ENST00000537297 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
USP15-204ENST00000537297 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
USP15-204ENST00000537297 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
USP15-204ENST00000537297 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms