RNA–Protein interactions for RNA: ENST00000535247.1

AC025252.1-201, humanhuman

TSL 4 BASIC

Gene AC025252.1, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025252.1-201ENST00000535247 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
AC025252.1-201ENST00000535247 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
AC025252.1-201ENST00000535247 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
AC025252.1-201ENST00000535247 PHF23Q9BUL5 403 aaPredicted RBP26.51■■□□□ 1.83
AC025252.1-201ENST00000535247 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
AC025252.1-201ENST00000535247 FOXD1Q16676 465 aa24.68■■□□□ 1.54
AC025252.1-201ENST00000535247 ABCC9O60706 1549 aa24.51■■□□□ 1.51
AC025252.1-201ENST00000535247 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
AC025252.1-201ENST00000535247 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
AC025252.1-201ENST00000535247 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
AC025252.1-201ENST00000535247 ADRA2BP18089 450 aa23.4■■□□□ 1.34
AC025252.1-201ENST00000535247 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
AC025252.1-201ENST00000535247 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
AC025252.1-201ENST00000535247 PIAS4Q8N2W9 510 aaPredicted RBP23.14■■□□□ 1.29
AC025252.1-201ENST00000535247 NACADO15069 1562 aa22.9■■□□□ 1.26
AC025252.1-201ENST00000535247 MSH5O43196 834 aa22.84■■□□□ 1.25
AC025252.1-201ENST00000535247 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
AC025252.1-201ENST00000535247 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
AC025252.1-201ENST00000535247 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
AC025252.1-201ENST00000535247 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
AC025252.1-201ENST00000535247 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
AC025252.1-201ENST00000535247 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
AC025252.1-201ENST00000535247 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
AC025252.1-201ENST00000535247 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
AC025252.1-201ENST00000535247 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
AC025252.1-201ENST00000535247 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
AC025252.1-201ENST00000535247 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
AC025252.1-201ENST00000535247 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
AC025252.1-201ENST00000535247 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
AC025252.1-201ENST00000535247 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
AC025252.1-201ENST00000535247 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
AC025252.1-201ENST00000535247 PPP4R3CPQ6ZMV5 832 aa21.34■■□□□ 1.01
AC025252.1-201ENST00000535247 CUX2O14529 1486 aa21.32■■□□□ 1
AC025252.1-201ENST00000535247 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
AC025252.1-201ENST00000535247 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
AC025252.1-201ENST00000535247 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
AC025252.1-201ENST00000535247 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
AC025252.1-201ENST00000535247 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
AC025252.1-201ENST00000535247 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
AC025252.1-201ENST00000535247 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
AC025252.1-201ENST00000535247 NESP48681 1621 aa20.93■□□□□ 0.94
AC025252.1-201ENST00000535247 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
AC025252.1-201ENST00000535247 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
AC025252.1-201ENST00000535247 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
AC025252.1-201ENST00000535247 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
AC025252.1-201ENST00000535247 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.91
AC025252.1-201ENST00000535247 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
AC025252.1-201ENST00000535247 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
AC025252.1-201ENST00000535247 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
AC025252.1-201ENST00000535247 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
AC025252.1-201ENST00000535247 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
AC025252.1-201ENST00000535247 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
AC025252.1-201ENST00000535247 HOXD11P31277 338 aaPredicted RBP20.58■□□□□ 0.89
AC025252.1-201ENST00000535247 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
AC025252.1-201ENST00000535247 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
AC025252.1-201ENST00000535247 KCNA4P22459 653 aa20.48■□□□□ 0.87
AC025252.1-201ENST00000535247 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
AC025252.1-201ENST00000535247 WDR62O43379 1518 aa20.45■□□□□ 0.86
AC025252.1-201ENST00000535247 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
AC025252.1-201ENST00000535247 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
AC025252.1-201ENST00000535247 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
AC025252.1-201ENST00000535247 WIZO95785 1651 aa20.31■□□□□ 0.84
AC025252.1-201ENST00000535247 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
AC025252.1-201ENST00000535247 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
AC025252.1-201ENST00000535247 CFTRP13569 1480 aa20.11■□□□□ 0.81
AC025252.1-201ENST00000535247 RIMBP3CA6NJZ7 1639 aa20.1■□□□□ 0.81
AC025252.1-201ENST00000535247 RIMBP3BA6NNM3 1639 aa20.1■□□□□ 0.81
AC025252.1-201ENST00000535247 RIMBP3Q9UFD9 1639 aa20.1■□□□□ 0.81
AC025252.1-201ENST00000535247 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
AC025252.1-201ENST00000535247 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
AC025252.1-201ENST00000535247 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
AC025252.1-201ENST00000535247 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
AC025252.1-201ENST00000535247 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
AC025252.1-201ENST00000535247 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
AC025252.1-201ENST00000535247 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
AC025252.1-201ENST00000535247 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
AC025252.1-201ENST00000535247 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
AC025252.1-201ENST00000535247 CHD1O14646 1710 aa19.84■□□□□ 0.77
AC025252.1-201ENST00000535247 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
AC025252.1-201ENST00000535247 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
AC025252.1-201ENST00000535247 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
AC025252.1-201ENST00000535247 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
AC025252.1-201ENST00000535247 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
AC025252.1-201ENST00000535247 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
AC025252.1-201ENST00000535247 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
AC025252.1-201ENST00000535247 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
AC025252.1-201ENST00000535247 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
AC025252.1-201ENST00000535247 FBLN2P98095 1184 aa19.61■□□□□ 0.73
AC025252.1-201ENST00000535247 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
AC025252.1-201ENST00000535247 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
AC025252.1-201ENST00000535247 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
AC025252.1-201ENST00000535247 RAD54L2Q9Y4B4 1467 aa19.49■□□□□ 0.71
AC025252.1-201ENST00000535247 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
AC025252.1-201ENST00000535247 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
AC025252.1-201ENST00000535247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
AC025252.1-201ENST00000535247 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
AC025252.1-201ENST00000535247 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
AC025252.1-201ENST00000535247 SOGA1O94964 1423 aa19.44■□□□□ 0.7
AC025252.1-201ENST00000535247 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
AC025252.1-201ENST00000535247 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms