RNA–Protein interactions for RNA: ENST00000535014.5

KDM5A-202, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-202ENST00000535014 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
KDM5A-202ENST00000535014 ABCC9O60706 1549 aa15.89■□□□□ 0.13
KDM5A-202ENST00000535014 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
KDM5A-202ENST00000535014 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
KDM5A-202ENST00000535014 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
KDM5A-202ENST00000535014 NACADO15069 1562 aa14.81□□□□□ -0.04
KDM5A-202ENST00000535014 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
KDM5A-202ENST00000535014 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
KDM5A-202ENST00000535014 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
KDM5A-202ENST00000535014 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
KDM5A-202ENST00000535014 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
KDM5A-202ENST00000535014 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
KDM5A-202ENST00000535014 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
KDM5A-202ENST00000535014 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
KDM5A-202ENST00000535014 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
KDM5A-202ENST00000535014 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
KDM5A-202ENST00000535014 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
KDM5A-202ENST00000535014 SCRIBQ14160 1630 aa14.08□□□□□ -0.15
KDM5A-202ENST00000535014 ZCCHC6Q5VYS8 1495 aaKnown RBP14.08□□□□□ -0.16
KDM5A-202ENST00000535014 CUX2O14529 1486 aa13.97□□□□□ -0.17
KDM5A-202ENST00000535014 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
KDM5A-202ENST00000535014 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
KDM5A-202ENST00000535014 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
KDM5A-202ENST00000535014 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
KDM5A-202ENST00000535014 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
KDM5A-202ENST00000535014 NESP48681 1621 aa13.53□□□□□ -0.24
KDM5A-202ENST00000535014 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
KDM5A-202ENST00000535014 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
KDM5A-202ENST00000535014 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
KDM5A-202ENST00000535014 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
KDM5A-202ENST00000535014 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
KDM5A-202ENST00000535014 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
KDM5A-202ENST00000535014 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
KDM5A-202ENST00000535014 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
KDM5A-202ENST00000535014 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
KDM5A-202ENST00000535014 WDR62O43379 1518 aa13.29□□□□□ -0.28
KDM5A-202ENST00000535014 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
KDM5A-202ENST00000535014 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
KDM5A-202ENST00000535014 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
KDM5A-202ENST00000535014 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
KDM5A-202ENST00000535014 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
KDM5A-202ENST00000535014 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
KDM5A-202ENST00000535014 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
KDM5A-202ENST00000535014 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
KDM5A-202ENST00000535014 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
KDM5A-202ENST00000535014 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
KDM5A-202ENST00000535014 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
KDM5A-202ENST00000535014 CFTRP13569 1480 aa12.97□□□□□ -0.33
KDM5A-202ENST00000535014 WIZO95785 1651 aa12.94□□□□□ -0.34
KDM5A-202ENST00000535014 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
KDM5A-202ENST00000535014 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
KDM5A-202ENST00000535014 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
KDM5A-202ENST00000535014 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
KDM5A-202ENST00000535014 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
KDM5A-202ENST00000535014 CHD1O14646 1710 aa12.82□□□□□ -0.36
KDM5A-202ENST00000535014 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
KDM5A-202ENST00000535014 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
KDM5A-202ENST00000535014 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
KDM5A-202ENST00000535014 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
KDM5A-202ENST00000535014 AEBP2Q6ZN18 517 aaPredicted RBP12.76□□□□□ -0.37
KDM5A-202ENST00000535014 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
KDM5A-202ENST00000535014 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
KDM5A-202ENST00000535014 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
KDM5A-202ENST00000535014 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
KDM5A-202ENST00000535014 CLASP1Q7Z460 1538 aa12.68□□□□□ -0.38
KDM5A-202ENST00000535014 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.386e-7■■□□□ 11.9
KDM5A-202ENST00000535014 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
KDM5A-202ENST00000535014 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
KDM5A-202ENST00000535014 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
KDM5A-202ENST00000535014 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
KDM5A-202ENST00000535014 FBLN2P98095 1184 aa12.57□□□□□ -0.4
KDM5A-202ENST00000535014 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
KDM5A-202ENST00000535014 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
KDM5A-202ENST00000535014 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
KDM5A-202ENST00000535014 RAD54L2Q9Y4B4 1467 aa12.51□□□□□ -0.41
KDM5A-202ENST00000535014 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
KDM5A-202ENST00000535014 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
KDM5A-202ENST00000535014 SOGA1O94964 1423 aa12.47□□□□□ -0.41
KDM5A-202ENST00000535014 GRIN2BQ13224 1484 aa12.46□□□□□ -0.41
KDM5A-202ENST00000535014 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
KDM5A-202ENST00000535014 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
KDM5A-202ENST00000535014 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
KDM5A-202ENST00000535014 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
KDM5A-202ENST00000535014 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
KDM5A-202ENST00000535014 CUX1P39880 1505 aa12.37□□□□□ -0.43
KDM5A-202ENST00000535014 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
KDM5A-202ENST00000535014 SHROOM2Q13796 1616 aa12.35□□□□□ -0.43
KDM5A-202ENST00000535014 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
KDM5A-202ENST00000535014 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
KDM5A-202ENST00000535014 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
KDM5A-202ENST00000535014 NUP160Q12769 1436 aa12.31□□□□□ -0.44
KDM5A-202ENST00000535014 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
KDM5A-202ENST00000535014 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
KDM5A-202ENST00000535014 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
KDM5A-202ENST00000535014 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
KDM5A-202ENST00000535014 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
KDM5A-202ENST00000535014 DIP2BQ9P265 1576 aa12.25□□□□□ -0.45
KDM5A-202ENST00000535014 KDM6BO15054 1643 aa12.22□□□□□ -0.45
KDM5A-202ENST00000535014 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
KDM5A-202ENST00000535014 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms