RNA–Protein interactions for RNA: ENST00000534992.5

FANCA-204, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-204ENST00000534992 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
FANCA-204ENST00000534992 ABCC9O60706 1549 aa33.12■■■□□ 2.89
FANCA-204ENST00000534992 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
FANCA-204ENST00000534992 DNAJC5BQ9UF47 199 aa31.81■■■□□ 2.68
FANCA-204ENST00000534992 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
FANCA-204ENST00000534992 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.492e-8■□□□□ 10
FANCA-204ENST00000534992 NACADO15069 1562 aa30.58■■■□□ 2.49
FANCA-204ENST00000534992 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
FANCA-204ENST00000534992 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
FANCA-204ENST00000534992 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
FANCA-204ENST00000534992 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
FANCA-204ENST00000534992 CECR2Q9BXF3 1484 aa29.94■■■□□ 2.38
FANCA-204ENST00000534992 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
FANCA-204ENST00000534992 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
FANCA-204ENST00000534992 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
FANCA-204ENST00000534992 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
FANCA-204ENST00000534992 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
FANCA-204ENST00000534992 CUX2O14529 1486 aa28.98■■■□□ 2.23
FANCA-204ENST00000534992 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
FANCA-204ENST00000534992 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
FANCA-204ENST00000534992 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
FANCA-204ENST00000534992 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
FANCA-204ENST00000534992 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
FANCA-204ENST00000534992 NESP48681 1621 aa28.1■■■□□ 2.09
FANCA-204ENST00000534992 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
FANCA-204ENST00000534992 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
FANCA-204ENST00000534992 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
FANCA-204ENST00000534992 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
FANCA-204ENST00000534992 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
FANCA-204ENST00000534992 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
FANCA-204ENST00000534992 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
FANCA-204ENST00000534992 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
FANCA-204ENST00000534992 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
FANCA-204ENST00000534992 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
FANCA-204ENST00000534992 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
FANCA-204ENST00000534992 OSCARQ8IYS5 282 aa27.45■■□□□ 1.98
FANCA-204ENST00000534992 WDR62O43379 1518 aa27.45■■□□□ 1.98
FANCA-204ENST00000534992 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
FANCA-204ENST00000534992 CADPSQ9ULU8 1353 aa27.28■■□□□ 1.96
FANCA-204ENST00000534992 RIMBP3CA6NJZ7 1639 aa27.26■■□□□ 1.95
FANCA-204ENST00000534992 RIMBP3BA6NNM3 1639 aa27.26■■□□□ 1.95
FANCA-204ENST00000534992 RIMBP3Q9UFD9 1639 aa27.26■■□□□ 1.95
FANCA-204ENST00000534992 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.95
FANCA-204ENST00000534992 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
FANCA-204ENST00000534992 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
FANCA-204ENST00000534992 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
FANCA-204ENST00000534992 TRHP20396 242 aaPredicted RBP27.04■■□□□ 1.92
FANCA-204ENST00000534992 FANCD2Q9BXW9 1451 aa27.03■■□□□ 1.92
FANCA-204ENST00000534992 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
FANCA-204ENST00000534992 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
FANCA-204ENST00000534992 WIZO95785 1651 aa26.76■■□□□ 1.87
FANCA-204ENST00000534992 CFTRP13569 1480 aa26.74■■□□□ 1.87
FANCA-204ENST00000534992 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
FANCA-204ENST00000534992 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
FANCA-204ENST00000534992 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
FANCA-204ENST00000534992 CHD1O14646 1710 aa26.59■■□□□ 1.85
FANCA-204ENST00000534992 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
FANCA-204ENST00000534992 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
FANCA-204ENST00000534992 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
FANCA-204ENST00000534992 FBLN2P98095 1184 aa26.45■■□□□ 1.82
FANCA-204ENST00000534992 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
FANCA-204ENST00000534992 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
FANCA-204ENST00000534992 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.85e-10■■■□□ 18.1
FANCA-204ENST00000534992 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
FANCA-204ENST00000534992 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
FANCA-204ENST00000534992 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
FANCA-204ENST00000534992 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
FANCA-204ENST00000534992 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
FANCA-204ENST00000534992 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
FANCA-204ENST00000534992 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
FANCA-204ENST00000534992 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
FANCA-204ENST00000534992 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
FANCA-204ENST00000534992 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
FANCA-204ENST00000534992 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
FANCA-204ENST00000534992 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
FANCA-204ENST00000534992 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
FANCA-204ENST00000534992 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
FANCA-204ENST00000534992 ILDR1Q86SU0 546 aaPredicted RBP25.92■■□□□ 1.74
FANCA-204ENST00000534992 SOGA1O94964 1423 aa25.9■■□□□ 1.74
FANCA-204ENST00000534992 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
FANCA-204ENST00000534992 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
FANCA-204ENST00000534992 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
FANCA-204ENST00000534992 KIF13AQ9H1H9 1805 aa25.74■■□□□ 1.71
FANCA-204ENST00000534992 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
FANCA-204ENST00000534992 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
FANCA-204ENST00000534992 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
FANCA-204ENST00000534992 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
FANCA-204ENST00000534992 CUX1P39880 1505 aa25.52■■□□□ 1.68
FANCA-204ENST00000534992 KDM6BO15054 1643 aa25.5■■□□□ 1.67
FANCA-204ENST00000534992 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
FANCA-204ENST00000534992 FAM69CQ0P6D2 419 aa25.47■■□□□ 1.67
FANCA-204ENST00000534992 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
FANCA-204ENST00000534992 SHROOM2Q13796 1616 aa25.44■■□□□ 1.66
FANCA-204ENST00000534992 ABCC10Q5T3U5 1492 aa25.42■■□□□ 1.66
FANCA-204ENST00000534992 NUP160Q12769 1436 aa25.4■■□□□ 1.66
FANCA-204ENST00000534992 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
FANCA-204ENST00000534992 DIP2BQ9P265 1576 aa25.37■■□□□ 1.65
FANCA-204ENST00000534992 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
FANCA-204ENST00000534992 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
FANCA-204ENST00000534992 TSPOAP1O95153 1857 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms