RNA–Protein interactions for RNA: ENST00000534567.5

HSPA8-223, Transcript of heat shock protein family A (Hsp70) member 8, human

TSL 4

Gene HSPA8, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HSPA8-223	ENST00000534567	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.33	□□□□□ -0.6
HSPA8-223	ENST00000534567	CHIC1	Q5VXU3	224 aa		10.92	□□□□□ -0.66
HSPA8-223	ENST00000534567	PHF23	Q9BUL5	403 aa	Predicted RBP	9.63	□□□□□ -0.87
HSPA8-223	ENST00000534567	SENP3	Q9H4L4	574 aa	Predicted RBP	9.57	□□□□□ -0.88
HSPA8-223	ENST00000534567	NISCH	Q9Y2I1	1504 aa		9.41	□□□□□ -0.9
HSPA8-223	ENST00000534567	ABCC9	O60706	1549 aa		9.19	□□□□□ -0.94
HSPA8-223	ENST00000534567	DNAJC5B	Q9UF47	199 aa		9.14	□□□□□ -0.95
HSPA8-223	ENST00000534567	FOXD1	Q16676	465 aa		8.93	□□□□□ -0.98
HSPA8-223	ENST00000534567	PLPPR3	Q6T4P5	718 aa		8.79	□□□□□ -1
HSPA8-223	ENST00000534567	DNAJC5	Q9H3Z4	198 aa		8.62	□□□□□ -1.03
HSPA8-223	ENST00000534567	CCDC180	Q9P1Z9	1646 aa		8.57	□□□□□ -1.04
HSPA8-223	ENST00000534567	PPP6R1	Q9UPN7	881 aa		8.54	□□□□□ -1.04
HSPA8-223	ENST00000534567	PABPN1	Q86U42	306 aa	Known RBP eCLIP	8.53	□□□□□ -1.04
HSPA8-223	ENST00000534567	ADRA2B	P18089	450 aa		8.5	□□□□□ -1.05
HSPA8-223	ENST00000534567	RB1CC1	Q8TDY2	1594 aa		8.41	□□□□□ -1.06
HSPA8-223	ENST00000534567	PIAS4	Q8N2W9	510 aa	Predicted RBP	8.37	□□□□□ -1.07
HSPA8-223	ENST00000534567	CECR2	Q9BXF3	1484 aa		8.29	□□□□□ -1.08
HSPA8-223	ENST00000534567	BICRA	Q9NZM4	1560 aa		8.29	□□□□□ -1.08
HSPA8-223	ENST00000534567	UNC13A	Q9UPW8	1703 aa		8.29	□□□□□ -1.08
HSPA8-223	ENST00000534567	CC2D2A	Q9P2K1	1620 aa		8.23	□□□□□ -1.09
HSPA8-223	ENST00000534567	MSH5	O43196	834 aa		8.23	□□□□□ -1.09
HSPA8-223	ENST00000534567	NACAD	O15069	1562 aa		8.22	□□□□□ -1.09
HSPA8-223	ENST00000534567	DCAF8L2	P0C7V8	631 aa		8.22	□□□□□ -1.09
HSPA8-223	ENST00000534567	TRIM41	Q8WV44	630 aa		8.1	□□□□□ -1.11
HSPA8-223	ENST00000534567	EIF4G1	Q04637	1599 aa	Known RBP	8.08	□□□□□ -1.12
HSPA8-223	ENST00000534567	CUX2	O14529	1486 aa		8	□□□□□ -1.13
HSPA8-223	ENST00000534567	SHROOM4	Q9ULL8	1493 aa		7.95	□□□□□ -1.14
HSPA8-223	ENST00000534567	MYO15B	Q96JP2	1530 aa		7.92	□□□□□ -1.14
HSPA8-223	ENST00000534567	ERCC6	Q03468	1493 aa		7.91	□□□□□ -1.14
HSPA8-223	ENST00000534567	SCRIB	Q14160	1630 aa		7.91	□□□□□ -1.14
HSPA8-223	ENST00000534567	NES	P48681	1621 aa		7.79	□□□□□ -1.16
HSPA8-223	ENST00000534567	PPP4R3CP	Q6ZMV5	832 aa		7.76	□□□□□ -1.17
HSPA8-223	ENST00000534567	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.75	□□□□□ -1.17
HSPA8-223	ENST00000534567	THOC2	Q8NI27	1593 aa	Known RBP	7.73	□□□□□ -1.17
HSPA8-223	ENST00000534567	POTED	Q86YR6	584 aa		7.73	□□□□□ -1.17
HSPA8-223	ENST00000534567	SCAF1	Q9H7N4	1312 aa	Known RBP	7.71	□□□□□ -1.18
HSPA8-223	ENST00000534567	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.69	□□□□□ -1.18
HSPA8-223	ENST00000534567	SMARCA2	P51531	1590 aa		7.67	□□□□□ -1.18
HSPA8-223	ENST00000534567	DCAF1	Q9Y4B6	1507 aa		7.66	□□□□□ -1.18
HSPA8-223	ENST00000534567	DMRT2	Q9Y5R5	561 aa		7.65	□□□□□ -1.18
HSPA8-223	ENST00000534567	NCAPD3	P42695	1498 aa		7.64	□□□□□ -1.19
HSPA8-223	ENST00000534567	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.61	□□□□□ -1.19
HSPA8-223	ENST00000534567	KIF21A	Q7Z4S6	1674 aa		7.6	□□□□□ -1.19
HSPA8-223	ENST00000534567	OSCAR	Q8IYS5	282 aa		7.59	□□□□□ -1.19
HSPA8-223	ENST00000534567	RIMBP3C	A6NJZ7	1639 aa		7.59	□□□□□ -1.19
HSPA8-223	ENST00000534567	RIMBP3B	A6NNM3	1639 aa		7.59	□□□□□ -1.19
HSPA8-223	ENST00000534567	RIMBP3	Q9UFD9	1639 aa		7.59	□□□□□ -1.19
HSPA8-223	ENST00000534567	ATAD2B	Q9ULI0	1458 aa		7.58	□□□□□ -1.2
HSPA8-223	ENST00000534567	TRH	P20396	242 aa	Predicted RBP	7.56	□□□□□ -1.2
HSPA8-223	ENST00000534567	CNKSR2	Q8WXI2	1034 aa		7.55	□□□□□ -1.2
HSPA8-223	ENST00000534567	HMGXB3	Q12766	1538 aa		7.52	□□□□□ -1.21
HSPA8-223	ENST00000534567	CYB5RL	Q6IPT4	315 aa		7.51	□□□□□ -1.21
HSPA8-223	ENST00000534567	LAMC3	Q9Y6N6	1575 aa		7.5	□□□□□ -1.21
HSPA8-223	ENST00000534567	ILDR1	Q86SU0	546 aa	Predicted RBP	7.5	□□□□□ -1.21
HSPA8-223	ENST00000534567	ARHGEF11	O15085	1522 aa		7.5	□□□□□ -1.21
HSPA8-223	ENST00000534567	MRC2	Q9UBG0	1479 aa		7.49	□□□□□ -1.21
HSPA8-223	ENST00000534567	WDR62	O43379	1518 aa		7.49	□□□□□ -1.21
HSPA8-223	ENST00000534567	MYT1	Q01538	1121 aa		7.49	□□□□□ -1.21
HSPA8-223	ENST00000534567	PDS5B	Q9NTI5	1447 aa		7.49	□□□□□ -1.21
HSPA8-223	ENST00000534567	NCBP3	Q53F19	620 aa	Known RBP	7.47	□□□□□ -1.21
HSPA8-223	ENST00000534567	KCNA4	P22459	653 aa		7.46	□□□□□ -1.22
HSPA8-223	ENST00000534567	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.46	□□□□□ -1.22
HSPA8-223	ENST00000534567	SLC24A1	O60721	1099 aa		7.45	□□□□□ -1.22
HSPA8-223	ENST00000534567	HOXD11	P31277	338 aa	Predicted RBP	7.44	□□□□□ -1.22
HSPA8-223	ENST00000534567	SMARCA4	P51532	1647 aa		7.44	□□□□□ -1.22
HSPA8-223	ENST00000534567	ARAP1	Q96P48	1450 aa		7.43	□□□□□ -1.22
HSPA8-223	ENST00000534567	RNF216	Q9NWF9	866 aa	Predicted RBP	7.43	□□□□□ -1.22
HSPA8-223	ENST00000534567	NPM3	O75607	178 aa	Known RBP	7.42	□□□□□ -1.22
HSPA8-223	ENST00000534567	CADPS	Q9ULU8	1353 aa		7.4	□□□□□ -1.22
HSPA8-223	ENST00000534567	TTBK1	Q5TCY1	1321 aa	Predicted RBP	7.39	□□□□□ -1.23
HSPA8-223	ENST00000534567	ZNF608	Q9ULD9	1512 aa	Predicted RBP	7.37	□□□□□ -1.23
HSPA8-223	ENST00000534567	PELP1	Q8IZL8	1130 aa	Known RBP	7.36	□□□□□ -1.23
HSPA8-223	ENST00000534567	CEP164	Q9UPV0	1460 aa		7.36	□□□□□ -1.23
HSPA8-223	ENST00000534567	URB2	Q14146	1524 aa	Known RBP	7.35	□□□□□ -1.23
HSPA8-223	ENST00000534567	FANCD2	Q9BXW9	1451 aa		7.33	□□□□□ -1.24
HSPA8-223	ENST00000534567	PEG3	Q9GZU2	1588 aa		7.33	□□□□□ -1.24
HSPA8-223	ENST00000534567	MROH2B	Q7Z745	1585 aa		7.3	□□□□□ -1.24
HSPA8-223	ENST00000534567	DCAF8L1	A6NGE4	600 aa		7.28	□□□□□ -1.24
HSPA8-223	ENST00000534567	CHD1	O14646	1710 aa		7.27	□□□□□ -1.25
HSPA8-223	ENST00000534567	FBLN2	P98095	1184 aa		7.25	□□□□□ -1.25
HSPA8-223	ENST00000534567	RSF1	Q96T23	1441 aa	Predicted RBP	7.24	□□□□□ -1.25
HSPA8-223	ENST00000534567	KDM4F	A0A1W2PPD8	638 aa		7.23	□□□□□ -1.25
HSPA8-223	ENST00000534567	EIF4G3	O43432	1585 aa	Known RBP	7.23	□□□□□ -1.25
HSPA8-223	ENST00000534567	AQR	O60306	1485 aa	Known RBP eCLIP	7.22	□□□□□ -1.25	8e-8	■■■■■ 28.5
HSPA8-223	ENST00000534567	IFT140	Q96RY7	1462 aa		7.22	□□□□□ -1.25
HSPA8-223	ENST00000534567	CFTR	P13569	1480 aa		7.21	□□□□□ -1.26
HSPA8-223	ENST00000534567	WIZ	O95785	1651 aa		7.18	□□□□□ -1.26
HSPA8-223	ENST00000534567	CLASP1	Q7Z460	1538 aa		7.17	□□□□□ -1.26
HSPA8-223	ENST00000534567	TOPBP1	Q92547	1522 aa		7.15	□□□□□ -1.27
HSPA8-223	ENST00000534567	GAPVD1	Q14C86	1478 aa		7.13	□□□□□ -1.27
HSPA8-223	ENST00000534567	TARBP1	Q13395	1621 aa	Known RBP	7.12	□□□□□ -1.27
HSPA8-223	ENST00000534567	ERCC6L2	Q5T890	1561 aa		7.12	□□□□□ -1.27
HSPA8-223	ENST00000534567	SNAPC4	Q5SXM2	1469 aa		7.11	□□□□□ -1.27
HSPA8-223	ENST00000534567	TDRD9	Q8NDG6	1382 aa	Known RBP	7.1	□□□□□ -1.27
HSPA8-223	ENST00000534567	KIF13A	Q9H1H9	1805 aa		7.09	□□□□□ -1.27
HSPA8-223	ENST00000534567	RAD54L2	Q9Y4B4	1467 aa		7.09	□□□□□ -1.27
HSPA8-223	ENST00000534567	RNF39	Q9H2S5	420 aa		7.08	□□□□□ -1.28
HSPA8-223	ENST00000534567	HECW2	Q9P2P5	1572 aa		7.08	□□□□□ -1.28
HSPA8-223	ENST00000534567	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.07	□□□□□ -1.28
HSPA8-223	ENST00000534567	ILDR2	Q71H61	639 aa		7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms