RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 NISCHQ9Y2I1 1504 aa21.53■■□□□ 1.04
SHARPIN-210ENST00000534435 ABCC9O60706 1549 aa20.23■□□□□ 0.83
SHARPIN-210ENST00000534435 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
SHARPIN-210ENST00000534435 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
SHARPIN-210ENST00000534435 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
SHARPIN-210ENST00000534435 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
SHARPIN-210ENST00000534435 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
SHARPIN-210ENST00000534435 NACADO15069 1562 aa18.53■□□□□ 0.56
SHARPIN-210ENST00000534435 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
SHARPIN-210ENST00000534435 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SHARPIN-210ENST00000534435 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
SHARPIN-210ENST00000534435 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
SHARPIN-210ENST00000534435 CC2D2AQ9P2K1 1620 aa18.14■□□□□ 0.49
SHARPIN-210ENST00000534435 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
SHARPIN-210ENST00000534435 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
SHARPIN-210ENST00000534435 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
SHARPIN-210ENST00000534435 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
SHARPIN-210ENST00000534435 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
SHARPIN-210ENST00000534435 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
SHARPIN-210ENST00000534435 CUX2O14529 1486 aa17.5■□□□□ 0.39
SHARPIN-210ENST00000534435 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
SHARPIN-210ENST00000534435 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
SHARPIN-210ENST00000534435 NESP48681 1621 aa17.25■□□□□ 0.35
SHARPIN-210ENST00000534435 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SHARPIN-210ENST00000534435 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
SHARPIN-210ENST00000534435 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
SHARPIN-210ENST00000534435 SMARCA2P51531 1590 aa17■□□□□ 0.31
SHARPIN-210ENST00000534435 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
SHARPIN-210ENST00000534435 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
SHARPIN-210ENST00000534435 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
SHARPIN-210ENST00000534435 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
SHARPIN-210ENST00000534435 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
SHARPIN-210ENST00000534435 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SHARPIN-210ENST00000534435 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
SHARPIN-210ENST00000534435 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
SHARPIN-210ENST00000534435 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
SHARPIN-210ENST00000534435 WDR62O43379 1518 aa16.67■□□□□ 0.26
SHARPIN-210ENST00000534435 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
SHARPIN-210ENST00000534435 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
SHARPIN-210ENST00000534435 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
SHARPIN-210ENST00000534435 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
SHARPIN-210ENST00000534435 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
SHARPIN-210ENST00000534435 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
SHARPIN-210ENST00000534435 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
SHARPIN-210ENST00000534435 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
SHARPIN-210ENST00000534435 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
SHARPIN-210ENST00000534435 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
SHARPIN-210ENST00000534435 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
SHARPIN-210ENST00000534435 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
SHARPIN-210ENST00000534435 WIZO95785 1651 aa16.4■□□□□ 0.22
SHARPIN-210ENST00000534435 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
SHARPIN-210ENST00000534435 CFTRP13569 1480 aa16.35■□□□□ 0.21
SHARPIN-210ENST00000534435 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
SHARPIN-210ENST00000534435 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
SHARPIN-210ENST00000534435 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
SHARPIN-210ENST00000534435 FBLN2P98095 1184 aa16.16■□□□□ 0.18
SHARPIN-210ENST00000534435 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
SHARPIN-210ENST00000534435 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.174e-9■■■■■ 46.5
SHARPIN-210ENST00000534435 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
SHARPIN-210ENST00000534435 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
SHARPIN-210ENST00000534435 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
SHARPIN-210ENST00000534435 CHD1O14646 1710 aa16.08■□□□□ 0.16
SHARPIN-210ENST00000534435 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
SHARPIN-210ENST00000534435 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
SHARPIN-210ENST00000534435 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
SHARPIN-210ENST00000534435 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
SHARPIN-210ENST00000534435 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.14
SHARPIN-210ENST00000534435 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
SHARPIN-210ENST00000534435 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
SHARPIN-210ENST00000534435 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
SHARPIN-210ENST00000534435 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
SHARPIN-210ENST00000534435 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
SHARPIN-210ENST00000534435 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
SHARPIN-210ENST00000534435 SOGA1O94964 1423 aa15.85■□□□□ 0.13
SHARPIN-210ENST00000534435 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
SHARPIN-210ENST00000534435 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
SHARPIN-210ENST00000534435 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
SHARPIN-210ENST00000534435 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
SHARPIN-210ENST00000534435 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
SHARPIN-210ENST00000534435 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
SHARPIN-210ENST00000534435 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
SHARPIN-210ENST00000534435 GRIN2BQ13224 1484 aa15.73■□□□□ 0.11
SHARPIN-210ENST00000534435 CUX1P39880 1505 aa15.67■□□□□ 0.1
SHARPIN-210ENST00000534435 KDM4FA0A1W2PPD8 638 aa15.63■□□□□ 0.09
SHARPIN-210ENST00000534435 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
SHARPIN-210ENST00000534435 CEP170Q5SW79 1584 aa15.58■□□□□ 0.09
SHARPIN-210ENST00000534435 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
SHARPIN-210ENST00000534435 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
SHARPIN-210ENST00000534435 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
SHARPIN-210ENST00000534435 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.08
SHARPIN-210ENST00000534435 NUP160Q12769 1436 aa15.51■□□□□ 0.07
SHARPIN-210ENST00000534435 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
SHARPIN-210ENST00000534435 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
SHARPIN-210ENST00000534435 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.07
SHARPIN-210ENST00000534435 ABCC10Q5T3U5 1492 aa15.46■□□□□ 0.06
SHARPIN-210ENST00000534435 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
SHARPIN-210ENST00000534435 SHROOM2Q13796 1616 aa15.45■□□□□ 0.06
SHARPIN-210ENST00000534435 DIP2BQ9P265 1576 aa15.39■□□□□ 0.05
SHARPIN-210ENST00000534435 KDM6BO15054 1643 aa15.39■□□□□ 0.05
SHARPIN-210ENST00000534435 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms