RNA–Protein interactions for RNA: ENST00000534134.1

TKFC-220, Transcript of triokinase and FMN cyclase, humanhuman

TSL 3

Gene TKFC, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-220ENST00000534134 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
TKFC-220ENST00000534134 ABCC9O60706 1549 aa23.19■■□□□ 1.3
TKFC-220ENST00000534134 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
TKFC-220ENST00000534134 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
TKFC-220ENST00000534134 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
TKFC-220ENST00000534134 NACADO15069 1562 aa21.57■■□□□ 1.04
TKFC-220ENST00000534134 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
TKFC-220ENST00000534134 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
TKFC-220ENST00000534134 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
TKFC-220ENST00000534134 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
TKFC-220ENST00000534134 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
TKFC-220ENST00000534134 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
TKFC-220ENST00000534134 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
TKFC-220ENST00000534134 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
TKFC-220ENST00000534134 EIF4G1Q04637 1599 aaKnown RBP20.77■□□□□ 0.92
TKFC-220ENST00000534134 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
TKFC-220ENST00000534134 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
TKFC-220ENST00000534134 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
TKFC-220ENST00000534134 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
TKFC-220ENST00000534134 CUX2O14529 1486 aa20.2■□□□□ 0.82
TKFC-220ENST00000534134 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
TKFC-220ENST00000534134 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
TKFC-220ENST00000534134 NESP48681 1621 aa19.79■□□□□ 0.76
TKFC-220ENST00000534134 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
TKFC-220ENST00000534134 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
TKFC-220ENST00000534134 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
TKFC-220ENST00000534134 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
TKFC-220ENST00000534134 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
TKFC-220ENST00000534134 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
TKFC-220ENST00000534134 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
TKFC-220ENST00000534134 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
TKFC-220ENST00000534134 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
TKFC-220ENST00000534134 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
TKFC-220ENST00000534134 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
TKFC-220ENST00000534134 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
TKFC-220ENST00000534134 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
TKFC-220ENST00000534134 WDR62O43379 1518 aa19.32■□□□□ 0.68
TKFC-220ENST00000534134 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
TKFC-220ENST00000534134 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
TKFC-220ENST00000534134 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
TKFC-220ENST00000534134 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
TKFC-220ENST00000534134 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
TKFC-220ENST00000534134 WIZO95785 1651 aa19.05■□□□□ 0.64
TKFC-220ENST00000534134 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
TKFC-220ENST00000534134 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
TKFC-220ENST00000534134 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
TKFC-220ENST00000534134 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
TKFC-220ENST00000534134 CFTRP13569 1480 aa18.95■□□□□ 0.62
TKFC-220ENST00000534134 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
TKFC-220ENST00000534134 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
TKFC-220ENST00000534134 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
TKFC-220ENST00000534134 IFT140Q96RY7 1462 aa18.77■□□□□ 0.6
TKFC-220ENST00000534134 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
TKFC-220ENST00000534134 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
TKFC-220ENST00000534134 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
TKFC-220ENST00000534134 CHD1O14646 1710 aa18.69■□□□□ 0.58
TKFC-220ENST00000534134 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
TKFC-220ENST00000534134 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
TKFC-220ENST00000534134 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
TKFC-220ENST00000534134 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
TKFC-220ENST00000534134 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
TKFC-220ENST00000534134 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
TKFC-220ENST00000534134 AQRO60306 1485 aaKnown RBP eCLIP18.55■□□□□ 0.564e-11■■■■■ 31.4
TKFC-220ENST00000534134 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
TKFC-220ENST00000534134 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
TKFC-220ENST00000534134 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
TKFC-220ENST00000534134 FBLN2P98095 1184 aa18.5■□□□□ 0.55
TKFC-220ENST00000534134 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
TKFC-220ENST00000534134 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
TKFC-220ENST00000534134 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
TKFC-220ENST00000534134 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
TKFC-220ENST00000534134 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
TKFC-220ENST00000534134 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
TKFC-220ENST00000534134 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
TKFC-220ENST00000534134 SOGA1O94964 1423 aa18.31■□□□□ 0.52
TKFC-220ENST00000534134 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
TKFC-220ENST00000534134 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
TKFC-220ENST00000534134 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
TKFC-220ENST00000534134 SYNJ2O15056 1496 aa18.25■□□□□ 0.51
TKFC-220ENST00000534134 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
TKFC-220ENST00000534134 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
TKFC-220ENST00000534134 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
TKFC-220ENST00000534134 CUX1P39880 1505 aa18.16■□□□□ 0.5
TKFC-220ENST00000534134 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
TKFC-220ENST00000534134 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
TKFC-220ENST00000534134 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
TKFC-220ENST00000534134 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
TKFC-220ENST00000534134 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
TKFC-220ENST00000534134 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
TKFC-220ENST00000534134 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
TKFC-220ENST00000534134 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
TKFC-220ENST00000534134 NUP160Q12769 1436 aa17.97■□□□□ 0.47
TKFC-220ENST00000534134 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
TKFC-220ENST00000534134 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.45
TKFC-220ENST00000534134 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
TKFC-220ENST00000534134 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
TKFC-220ENST00000534134 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
TKFC-220ENST00000534134 FAM69CQ0P6D2 419 aa17.8■□□□□ 0.44
TKFC-220ENST00000534134 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
TKFC-220ENST00000534134 KDM6BO15054 1643 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms