RNA–Protein interactions for RNA: ENST00000531852.5

XRRA1-216, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 3

Gene XRRA1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-216ENST00000531852 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
XRRA1-216ENST00000531852 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
XRRA1-216ENST00000531852 ABCC9O60706 1549 aa24.94■■□□□ 1.58
XRRA1-216ENST00000531852 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
XRRA1-216ENST00000531852 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
XRRA1-216ENST00000531852 NACADO15069 1562 aa24.01■■□□□ 1.43
XRRA1-216ENST00000531852 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
XRRA1-216ENST00000531852 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
XRRA1-216ENST00000531852 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
XRRA1-216ENST00000531852 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
XRRA1-216ENST00000531852 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
XRRA1-216ENST00000531852 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
XRRA1-216ENST00000531852 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
XRRA1-216ENST00000531852 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
XRRA1-216ENST00000531852 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
XRRA1-216ENST00000531852 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
XRRA1-216ENST00000531852 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
XRRA1-216ENST00000531852 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
XRRA1-216ENST00000531852 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
XRRA1-216ENST00000531852 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
XRRA1-216ENST00000531852 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
XRRA1-216ENST00000531852 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
XRRA1-216ENST00000531852 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
XRRA1-216ENST00000531852 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
XRRA1-216ENST00000531852 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
XRRA1-216ENST00000531852 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
XRRA1-216ENST00000531852 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
XRRA1-216ENST00000531852 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
XRRA1-216ENST00000531852 WIZO95785 1651 aa22■■□□□ 1.11
XRRA1-216ENST00000531852 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
XRRA1-216ENST00000531852 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
XRRA1-216ENST00000531852 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
XRRA1-216ENST00000531852 NESP48681 1621 aa21.63■■□□□ 1.05
XRRA1-216ENST00000531852 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
XRRA1-216ENST00000531852 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
XRRA1-216ENST00000531852 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
XRRA1-216ENST00000531852 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
XRRA1-216ENST00000531852 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
XRRA1-216ENST00000531852 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
XRRA1-216ENST00000531852 CFTRP13569 1480 aa21.38■■□□□ 1.01
XRRA1-216ENST00000531852 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
XRRA1-216ENST00000531852 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
XRRA1-216ENST00000531852 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
XRRA1-216ENST00000531852 CUX2O14529 1486 aa21.25■□□□□ 0.99
XRRA1-216ENST00000531852 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
XRRA1-216ENST00000531852 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
XRRA1-216ENST00000531852 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
XRRA1-216ENST00000531852 WDR62O43379 1518 aa21.14■□□□□ 0.98
XRRA1-216ENST00000531852 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
XRRA1-216ENST00000531852 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
XRRA1-216ENST00000531852 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
XRRA1-216ENST00000531852 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
XRRA1-216ENST00000531852 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
XRRA1-216ENST00000531852 CUX1P39880 1505 aa20.8■□□□□ 0.92
XRRA1-216ENST00000531852 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
XRRA1-216ENST00000531852 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
XRRA1-216ENST00000531852 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
XRRA1-216ENST00000531852 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
XRRA1-216ENST00000531852 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
XRRA1-216ENST00000531852 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
XRRA1-216ENST00000531852 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
XRRA1-216ENST00000531852 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
XRRA1-216ENST00000531852 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
XRRA1-216ENST00000531852 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
XRRA1-216ENST00000531852 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
XRRA1-216ENST00000531852 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
XRRA1-216ENST00000531852 SOGA1O94964 1423 aa20.61■□□□□ 0.89
XRRA1-216ENST00000531852 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
XRRA1-216ENST00000531852 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
XRRA1-216ENST00000531852 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
XRRA1-216ENST00000531852 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
XRRA1-216ENST00000531852 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
XRRA1-216ENST00000531852 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
XRRA1-216ENST00000531852 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
XRRA1-216ENST00000531852 CHD1O14646 1710 aa20.46■□□□□ 0.87
XRRA1-216ENST00000531852 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
XRRA1-216ENST00000531852 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
XRRA1-216ENST00000531852 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
XRRA1-216ENST00000531852 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
XRRA1-216ENST00000531852 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
XRRA1-216ENST00000531852 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
XRRA1-216ENST00000531852 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
XRRA1-216ENST00000531852 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
XRRA1-216ENST00000531852 FBLN2P98095 1184 aa20.2■□□□□ 0.82
XRRA1-216ENST00000531852 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
XRRA1-216ENST00000531852 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
XRRA1-216ENST00000531852 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
XRRA1-216ENST00000531852 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
XRRA1-216ENST00000531852 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
XRRA1-216ENST00000531852 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
XRRA1-216ENST00000531852 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
XRRA1-216ENST00000531852 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
XRRA1-216ENST00000531852 CUL7Q14999 1698 aa20.11■□□□□ 0.81
XRRA1-216ENST00000531852 IGF1RP08069 1367 aa20.09■□□□□ 0.81
XRRA1-216ENST00000531852 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
XRRA1-216ENST00000531852 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
XRRA1-216ENST00000531852 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
XRRA1-216ENST00000531852 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
XRRA1-216ENST00000531852 NUP160Q12769 1436 aa20.05■□□□□ 0.8
XRRA1-216ENST00000531852 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms