RNA–Protein interactions for RNA: ENST00000531687.1

THUMPD2-209, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-209ENST00000531687 NISCHQ9Y2I1 1504 aa41.41■■■■■ 4.22
THUMPD2-209ENST00000531687 CCDC180Q9P1Z9 1646 aa37.04■■■■□ 3.52
THUMPD2-209ENST00000531687 ABCC9O60706 1549 aa36.25■■■■□ 3.39
THUMPD2-209ENST00000531687 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
THUMPD2-209ENST00000531687 NACADO15069 1562 aa34.8■■■■□ 3.16
THUMPD2-209ENST00000531687 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
THUMPD2-209ENST00000531687 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
THUMPD2-209ENST00000531687 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
THUMPD2-209ENST00000531687 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
THUMPD2-209ENST00000531687 UNC13AQ9UPW8 1703 aa34.14■■■■□ 3.06
THUMPD2-209ENST00000531687 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
THUMPD2-209ENST00000531687 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
THUMPD2-209ENST00000531687 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
THUMPD2-209ENST00000531687 SHROOM4Q9ULL8 1493 aa33.54■■■□□ 2.96
THUMPD2-209ENST00000531687 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
THUMPD2-209ENST00000531687 EIF4G1Q04637 1599 aaKnown RBP32.95■■■□□ 2.86
THUMPD2-209ENST00000531687 CC2D2AQ9P2K1 1620 aa32.85■■■□□ 2.85
THUMPD2-209ENST00000531687 CECR2Q9BXF3 1484 aa32.62■■■□□ 2.81
THUMPD2-209ENST00000531687 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
THUMPD2-209ENST00000531687 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
THUMPD2-209ENST00000531687 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
THUMPD2-209ENST00000531687 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
THUMPD2-209ENST00000531687 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
THUMPD2-209ENST00000531687 HMGXB3Q12766 1538 aa31.97■■■□□ 2.71
THUMPD2-209ENST00000531687 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
THUMPD2-209ENST00000531687 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
THUMPD2-209ENST00000531687 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
THUMPD2-209ENST00000531687 WIZO95785 1651 aa31.55■■■□□ 2.64
THUMPD2-209ENST00000531687 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
THUMPD2-209ENST00000531687 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
THUMPD2-209ENST00000531687 NESP48681 1621 aa31.31■■■□□ 2.6
THUMPD2-209ENST00000531687 ERCC6Q03468 1493 aa31.28■■■□□ 2.6
THUMPD2-209ENST00000531687 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
THUMPD2-209ENST00000531687 CUX2O14529 1486 aa31.1■■■□□ 2.57
THUMPD2-209ENST00000531687 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
THUMPD2-209ENST00000531687 KIF21AQ7Z4S6 1674 aa31.04■■■□□ 2.56
THUMPD2-209ENST00000531687 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
THUMPD2-209ENST00000531687 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.56
THUMPD2-209ENST00000531687 CFTRP13569 1480 aa30.89■■■□□ 2.53
THUMPD2-209ENST00000531687 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
THUMPD2-209ENST00000531687 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
THUMPD2-209ENST00000531687 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
THUMPD2-209ENST00000531687 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
THUMPD2-209ENST00000531687 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
THUMPD2-209ENST00000531687 AEBP2Q6ZN18 517 aaPredicted RBP30.73■■■□□ 2.51
THUMPD2-209ENST00000531687 WDR62O43379 1518 aa30.71■■■□□ 2.51
THUMPD2-209ENST00000531687 CHIC1Q5VXU3 224 aa30.51■■■□□ 2.47
THUMPD2-209ENST00000531687 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
THUMPD2-209ENST00000531687 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
THUMPD2-209ENST00000531687 ABCC8Q09428 1581 aa30.25■■■□□ 2.43
THUMPD2-209ENST00000531687 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
THUMPD2-209ENST00000531687 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
THUMPD2-209ENST00000531687 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
THUMPD2-209ENST00000531687 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
THUMPD2-209ENST00000531687 TARBP1Q13395 1621 aaKnown RBP29.98■■■□□ 2.39
THUMPD2-209ENST00000531687 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
THUMPD2-209ENST00000531687 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
THUMPD2-209ENST00000531687 CUX1P39880 1505 aa29.94■■■□□ 2.38
THUMPD2-209ENST00000531687 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
THUMPD2-209ENST00000531687 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
THUMPD2-209ENST00000531687 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
THUMPD2-209ENST00000531687 RAD54L2Q9Y4B4 1467 aa29.79■■■□□ 2.36
THUMPD2-209ENST00000531687 SOGA1O94964 1423 aa29.78■■■□□ 2.36
THUMPD2-209ENST00000531687 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.35
THUMPD2-209ENST00000531687 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
THUMPD2-209ENST00000531687 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
THUMPD2-209ENST00000531687 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
THUMPD2-209ENST00000531687 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
THUMPD2-209ENST00000531687 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
THUMPD2-209ENST00000531687 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
THUMPD2-209ENST00000531687 ABCA10Q8WWZ4 1543 aa29.59■■■□□ 2.33
THUMPD2-209ENST00000531687 CHD1O14646 1710 aa29.59■■■□□ 2.33
THUMPD2-209ENST00000531687 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
THUMPD2-209ENST00000531687 PBRM1Q86U86 1689 aa29.54■■■□□ 2.32
THUMPD2-209ENST00000531687 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
THUMPD2-209ENST00000531687 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
THUMPD2-209ENST00000531687 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
THUMPD2-209ENST00000531687 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
THUMPD2-209ENST00000531687 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
THUMPD2-209ENST00000531687 FBLN2P98095 1184 aa29.31■■■□□ 2.28
THUMPD2-209ENST00000531687 RIMBP3CA6NJZ7 1639 aa29.31■■■□□ 2.28
THUMPD2-209ENST00000531687 RIMBP3BA6NNM3 1639 aa29.31■■■□□ 2.28
THUMPD2-209ENST00000531687 RIMBP3Q9UFD9 1639 aa29.31■■■□□ 2.28
THUMPD2-209ENST00000531687 ADAMTS12P58397 1594 aa29.28■■■□□ 2.28
THUMPD2-209ENST00000531687 ARHGEF11O15085 1522 aa29.26■■■□□ 2.27
THUMPD2-209ENST00000531687 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
THUMPD2-209ENST00000531687 ERICH3Q5RHP9 1530 aa29.25■■■□□ 2.27
THUMPD2-209ENST00000531687 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
THUMPD2-209ENST00000531687 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
THUMPD2-209ENST00000531687 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
THUMPD2-209ENST00000531687 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
THUMPD2-209ENST00000531687 NUP160Q12769 1436 aa29.04■■■□□ 2.24
THUMPD2-209ENST00000531687 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
THUMPD2-209ENST00000531687 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
THUMPD2-209ENST00000531687 ARAP1Q96P48 1450 aa29■■■□□ 2.23
THUMPD2-209ENST00000531687 CUL7Q14999 1698 aa28.99■■■□□ 2.23
THUMPD2-209ENST00000531687 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
THUMPD2-209ENST00000531687 IGF1RP08069 1367 aa28.88■■■□□ 2.21
THUMPD2-209ENST00000531687 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
THUMPD2-209ENST00000531687 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms