RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-208ENST00000529970 NISCHQ9Y2I1 1504 aa10.07□□□□□ -0.8
ARHGEF12-208ENST00000529970 ABCC9O60706 1549 aa9.47□□□□□ -0.89
ARHGEF12-208ENST00000529970 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
ARHGEF12-208ENST00000529970 DNAJC5BQ9UF47 199 aa9.02□□□□□ -0.97
ARHGEF12-208ENST00000529970 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
ARHGEF12-208ENST00000529970 NACADO15069 1562 aa8.81□□□□□ -1
ARHGEF12-208ENST00000529970 PABPN1Q86U42 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
ARHGEF12-208ENST00000529970 DCAF8L2P0C7V8 631 aa8.75□□□□□ -1.01
ARHGEF12-208ENST00000529970 DNAJC5Q9H3Z4 198 aa8.67□□□□□ -1.02
ARHGEF12-208ENST00000529970 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
ARHGEF12-208ENST00000529970 CECR2Q9BXF3 1484 aa8.6□□□□□ -1.03
ARHGEF12-208ENST00000529970 MYO15BQ96JP2 1530 aa8.58□□□□□ -1.04
ARHGEF12-208ENST00000529970 BICRAQ9NZM4 1560 aa8.52□□□□□ -1.05
ARHGEF12-208ENST00000529970 CC2D2AQ9P2K1 1620 aa8.5□□□□□ -1.05
ARHGEF12-208ENST00000529970 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
ARHGEF12-208ENST00000529970 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
ARHGEF12-208ENST00000529970 CUX2O14529 1486 aa8.37□□□□□ -1.07
ARHGEF12-208ENST00000529970 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
ARHGEF12-208ENST00000529970 SCRIBQ14160 1630 aa8.33□□□□□ -1.08
ARHGEF12-208ENST00000529970 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
ARHGEF12-208ENST00000529970 ZCCHC6Q5VYS8 1495 aaKnown RBP8.27□□□□□ -1.09
ARHGEF12-208ENST00000529970 TRIM41Q8WV44 630 aa8.2□□□□□ -1.1
ARHGEF12-208ENST00000529970 NCAPD3P42695 1498 aa8.11□□□□□ -1.11
ARHGEF12-208ENST00000529970 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
ARHGEF12-208ENST00000529970 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
ARHGEF12-208ENST00000529970 HMGXB3Q12766 1538 aa8.02□□□□□ -1.13
ARHGEF12-208ENST00000529970 ATAD2BQ9ULI0 1458 aa8.01□□□□□ -1.13
ARHGEF12-208ENST00000529970 LAMC3Q9Y6N6 1575 aa7.98□□□□□ -1.13
ARHGEF12-208ENST00000529970 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
ARHGEF12-208ENST00000529970 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
ARHGEF12-208ENST00000529970 NESP48681 1621 aa7.97□□□□□ -1.13
ARHGEF12-208ENST00000529970 THOC2Q8NI27 1593 aaKnown RBP7.96□□□□□ -1.13
ARHGEF12-208ENST00000529970 AEBP2Q6ZN18 517 aaPredicted RBP7.93□□□□□ -1.14
ARHGEF12-208ENST00000529970 MRC2Q9UBG0 1479 aa7.92□□□□□ -1.14
ARHGEF12-208ENST00000529970 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
ARHGEF12-208ENST00000529970 SMARCA4P51532 1647 aa7.9□□□□□ -1.14
ARHGEF12-208ENST00000529970 BAZ1AQ9NRL2 1556 aaPredicted RBP7.9□□□□□ -1.15
ARHGEF12-208ENST00000529970 CADPSQ9ULU8 1353 aa7.87□□□□□ -1.15
ARHGEF12-208ENST00000529970 TRHP20396 242 aaPredicted RBP7.85□□□□□ -1.15
ARHGEF12-208ENST00000529970 WDR62O43379 1518 aa7.85□□□□□ -1.15
ARHGEF12-208ENST00000529970 CEP164Q9UPV0 1460 aa7.84□□□□□ -1.15
ARHGEF12-208ENST00000529970 CHIC1Q5VXU3 224 aa7.84□□□□□ -1.15
ARHGEF12-208ENST00000529970 KIF21AQ7Z4S6 1674 aa7.83□□□□□ -1.16
ARHGEF12-208ENST00000529970 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
ARHGEF12-208ENST00000529970 FANCD2Q9BXW9 1451 aa7.77□□□□□ -1.17
ARHGEF12-208ENST00000529970 CYB5RLQ6IPT4 315 aa7.75□□□□□ -1.17
ARHGEF12-208ENST00000529970 RIMBP3CA6NJZ7 1639 aa7.75□□□□□ -1.17
ARHGEF12-208ENST00000529970 RIMBP3BA6NNM3 1639 aa7.75□□□□□ -1.17
ARHGEF12-208ENST00000529970 RIMBP3Q9UFD9 1639 aa7.75□□□□□ -1.17
ARHGEF12-208ENST00000529970 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
ARHGEF12-208ENST00000529970 IFT140Q96RY7 1462 aa7.71□□□□□ -1.18
ARHGEF12-208ENST00000529970 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
ARHGEF12-208ENST00000529970 EHMT2Q96KQ7 1210 aa7.68□□□□□ -1.18
ARHGEF12-208ENST00000529970 RSF1Q96T23 1441 aaPredicted RBP7.68□□□□□ -1.18
ARHGEF12-208ENST00000529970 CFTRP13569 1480 aa7.68□□□□□ -1.18
ARHGEF12-208ENST00000529970 FBLN2P98095 1184 aa7.66□□□□□ -1.18
ARHGEF12-208ENST00000529970 ABCC8Q09428 1581 aa7.66□□□□□ -1.18
ARHGEF12-208ENST00000529970 URB2Q14146 1524 aaKnown RBP7.65□□□□□ -1.19
ARHGEF12-208ENST00000529970 ARAP1Q96P48 1450 aa7.61□□□□□ -1.19
ARHGEF12-208ENST00000529970 ZNF608Q9ULD9 1512 aaPredicted RBP7.58□□□□□ -1.2
ARHGEF12-208ENST00000529970 CHMP7Q8WUX9 453 aaPredicted RBP7.57□□□□□ -1.2
ARHGEF12-208ENST00000529970 WIZO95785 1651 aa7.56□□□□□ -1.2
ARHGEF12-208ENST00000529970 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
ARHGEF12-208ENST00000529970 TOP2AP11388 1531 aaKnown RBP7.56□□□□□ -1.2
ARHGEF12-208ENST00000529970 EIF4G3O43432 1585 aaKnown RBP7.55□□□□□ -1.2
ARHGEF12-208ENST00000529970 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
ARHGEF12-208ENST00000529970 DNMBPQ6XZF7 1577 aa7.52□□□□□ -1.2
ARHGEF12-208ENST00000529970 AQRO60306 1485 aaKnown RBP eCLIP7.52□□□□□ -1.219e-7■■■■□ 21.5
ARHGEF12-208ENST00000529970 CHD1O14646 1710 aa7.51□□□□□ -1.21
ARHGEF12-208ENST00000529970 PRDM2Q13029 1718 aa7.5□□□□□ -1.21
ARHGEF12-208ENST00000529970 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
ARHGEF12-208ENST00000529970 MAGI1Q96QZ7 1491 aaPredicted RBP7.49□□□□□ -1.21
ARHGEF12-208ENST00000529970 GAPVD1Q14C86 1478 aa7.49□□□□□ -1.21
ARHGEF12-208ENST00000529970 SOGA1O94964 1423 aa7.48□□□□□ -1.21
ARHGEF12-208ENST00000529970 SNAPC4Q5SXM2 1469 aa7.47□□□□□ -1.21
ARHGEF12-208ENST00000529970 NPM1P06748 294 aaKnown RBP eCLIP7.47□□□□□ -1.21
ARHGEF12-208ENST00000529970 GRIN2BQ13224 1484 aa7.47□□□□□ -1.21
ARHGEF12-208ENST00000529970 CLASP1Q7Z460 1538 aa7.46□□□□□ -1.21
ARHGEF12-208ENST00000529970 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
ARHGEF12-208ENST00000529970 SYNJ2O15056 1496 aa7.45□□□□□ -1.22
ARHGEF12-208ENST00000529970 POLA1P09884 1462 aaPredicted RBP7.45□□□□□ -1.22
ARHGEF12-208ENST00000529970 ILDR1Q86SU0 546 aaPredicted RBP7.44□□□□□ -1.22
ARHGEF12-208ENST00000529970 TARBP1Q13395 1621 aaKnown RBP7.44□□□□□ -1.22
ARHGEF12-208ENST00000529970 CCDC88BA6NC98 1476 aa7.44□□□□□ -1.22
ARHGEF12-208ENST00000529970 PLPPR3Q6T4P5 718 aa7.43□□□□□ -1.22
ARHGEF12-208ENST00000529970 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
ARHGEF12-208ENST00000529970 FAM69CQ0P6D2 419 aa7.38□□□□□ -1.23
ARHGEF12-208ENST00000529970 FGD5Q6ZNL6 1462 aa7.37□□□□□ -1.23
ARHGEF12-208ENST00000529970 GRIN2AQ12879 1464 aa7.32□□□□□ -1.24
ARHGEF12-208ENST00000529970 ABCC10Q5T3U5 1492 aa7.31□□□□□ -1.24
ARHGEF12-208ENST00000529970 KDM6BO15054 1643 aa7.31□□□□□ -1.24
ARHGEF12-208ENST00000529970 CEP170Q5SW79 1584 aa7.3□□□□□ -1.24
ARHGEF12-208ENST00000529970 KDM4FA0A1W2PPD8 638 aa7.3□□□□□ -1.24
ARHGEF12-208ENST00000529970 FHAD1B1AJZ9 1412 aa7.3□□□□□ -1.24
ARHGEF12-208ENST00000529970 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
ARHGEF12-208ENST00000529970 NUP160Q12769 1436 aa7.3□□□□□ -1.24
ARHGEF12-208ENST00000529970 ERCC6L2Q5T890 1561 aa7.29□□□□□ -1.24
ARHGEF12-208ENST00000529970 ABCA10Q8WWZ4 1543 aa7.29□□□□□ -1.24
ARHGEF12-208ENST00000529970 PRG4Q92954 1404 aaPredicted RBP7.29□□□□□ -1.24
ARHGEF12-208ENST00000529970 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms