RNA–Protein interactions for RNA: ENST00000529679.1

PSMD13-210, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 507 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-210ENST00000529679 NISCHQ9Y2I1 1504 aa22.12■■□□□ 1.13
PSMD13-210ENST00000529679 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
PSMD13-210ENST00000529679 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
PSMD13-210ENST00000529679 ABCC9O60706 1549 aa19.51■□□□□ 0.71
PSMD13-210ENST00000529679 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
PSMD13-210ENST00000529679 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
PSMD13-210ENST00000529679 NACADO15069 1562 aa18.59■□□□□ 0.57
PSMD13-210ENST00000529679 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
PSMD13-210ENST00000529679 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
PSMD13-210ENST00000529679 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
PSMD13-210ENST00000529679 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
PSMD13-210ENST00000529679 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
PSMD13-210ENST00000529679 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
PSMD13-210ENST00000529679 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
PSMD13-210ENST00000529679 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
PSMD13-210ENST00000529679 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
PSMD13-210ENST00000529679 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
PSMD13-210ENST00000529679 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
PSMD13-210ENST00000529679 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
PSMD13-210ENST00000529679 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
PSMD13-210ENST00000529679 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
PSMD13-210ENST00000529679 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
PSMD13-210ENST00000529679 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
PSMD13-210ENST00000529679 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
PSMD13-210ENST00000529679 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
PSMD13-210ENST00000529679 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
PSMD13-210ENST00000529679 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
PSMD13-210ENST00000529679 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
PSMD13-210ENST00000529679 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
PSMD13-210ENST00000529679 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
PSMD13-210ENST00000529679 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
PSMD13-210ENST00000529679 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
PSMD13-210ENST00000529679 WIZO95785 1651 aa16.8■□□□□ 0.28
PSMD13-210ENST00000529679 NESP48681 1621 aa16.79■□□□□ 0.28
PSMD13-210ENST00000529679 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
PSMD13-210ENST00000529679 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
PSMD13-210ENST00000529679 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
PSMD13-210ENST00000529679 CUX2O14529 1486 aa16.69■□□□□ 0.26
PSMD13-210ENST00000529679 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
PSMD13-210ENST00000529679 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
PSMD13-210ENST00000529679 CFTRP13569 1480 aa16.54■□□□□ 0.24
PSMD13-210ENST00000529679 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
PSMD13-210ENST00000529679 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
PSMD13-210ENST00000529679 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
PSMD13-210ENST00000529679 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
PSMD13-210ENST00000529679 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
PSMD13-210ENST00000529679 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
PSMD13-210ENST00000529679 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
PSMD13-210ENST00000529679 WDR62O43379 1518 aa16.4■□□□□ 0.22
PSMD13-210ENST00000529679 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
PSMD13-210ENST00000529679 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
PSMD13-210ENST00000529679 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
PSMD13-210ENST00000529679 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
PSMD13-210ENST00000529679 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
PSMD13-210ENST00000529679 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
PSMD13-210ENST00000529679 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
PSMD13-210ENST00000529679 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
PSMD13-210ENST00000529679 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
PSMD13-210ENST00000529679 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
PSMD13-210ENST00000529679 SOGA1O94964 1423 aa16.02■□□□□ 0.16
PSMD13-210ENST00000529679 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
PSMD13-210ENST00000529679 CUX1P39880 1505 aa15.99■□□□□ 0.15
PSMD13-210ENST00000529679 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
PSMD13-210ENST00000529679 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.151e-12■■■□□ 14.7
PSMD13-210ENST00000529679 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
PSMD13-210ENST00000529679 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
PSMD13-210ENST00000529679 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
PSMD13-210ENST00000529679 FBLN2P98095 1184 aa15.92■□□□□ 0.14
PSMD13-210ENST00000529679 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
PSMD13-210ENST00000529679 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
PSMD13-210ENST00000529679 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
PSMD13-210ENST00000529679 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
PSMD13-210ENST00000529679 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
PSMD13-210ENST00000529679 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
PSMD13-210ENST00000529679 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
PSMD13-210ENST00000529679 FOXD1Q16676 465 aa15.82■□□□□ 0.12
PSMD13-210ENST00000529679 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
PSMD13-210ENST00000529679 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
PSMD13-210ENST00000529679 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
PSMD13-210ENST00000529679 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
PSMD13-210ENST00000529679 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
PSMD13-210ENST00000529679 SYNJ2O15056 1496 aa15.75■□□□□ 0.11
PSMD13-210ENST00000529679 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
PSMD13-210ENST00000529679 CHD1O14646 1710 aa15.72■□□□□ 0.11
PSMD13-210ENST00000529679 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
PSMD13-210ENST00000529679 RIMBP3CA6NJZ7 1639 aa15.67■□□□□ 0.1
PSMD13-210ENST00000529679 RIMBP3BA6NNM3 1639 aa15.67■□□□□ 0.1
PSMD13-210ENST00000529679 RIMBP3Q9UFD9 1639 aa15.67■□□□□ 0.1
PSMD13-210ENST00000529679 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
PSMD13-210ENST00000529679 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
PSMD13-210ENST00000529679 CYB5RLQ6IPT4 315 aa15.64■□□□□ 0.09
PSMD13-210ENST00000529679 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
PSMD13-210ENST00000529679 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
PSMD13-210ENST00000529679 CLASP1Q7Z460 1538 aa15.62■□□□□ 0.09
PSMD13-210ENST00000529679 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
PSMD13-210ENST00000529679 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
PSMD13-210ENST00000529679 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
PSMD13-210ENST00000529679 NUP160Q12769 1436 aa15.55■□□□□ 0.08
PSMD13-210ENST00000529679 IGF1RP08069 1367 aa15.52■□□□□ 0.08
PSMD13-210ENST00000529679 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms