RNA–Protein interactions for RNA: ENST00000528125.5

C11orf1-202, Transcript of chromosome 11 open reading frame 1, humanhuman

TSL 2 BASIC

Gene C11orf1, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-202ENST00000528125 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
C11orf1-202ENST00000528125 ABCC9O60706 1549 aa29.79■■■□□ 2.36
C11orf1-202ENST00000528125 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
C11orf1-202ENST00000528125 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
C11orf1-202ENST00000528125 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
C11orf1-202ENST00000528125 NACADO15069 1562 aa27.69■■■□□ 2.02
C11orf1-202ENST00000528125 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
C11orf1-202ENST00000528125 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.99
C11orf1-202ENST00000528125 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
C11orf1-202ENST00000528125 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
C11orf1-202ENST00000528125 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
C11orf1-202ENST00000528125 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
C11orf1-202ENST00000528125 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
C11orf1-202ENST00000528125 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
C11orf1-202ENST00000528125 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
C11orf1-202ENST00000528125 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
C11orf1-202ENST00000528125 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
C11orf1-202ENST00000528125 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
C11orf1-202ENST00000528125 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
C11orf1-202ENST00000528125 CUX2O14529 1486 aa25.91■■□□□ 1.74
C11orf1-202ENST00000528125 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
C11orf1-202ENST00000528125 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
C11orf1-202ENST00000528125 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
C11orf1-202ENST00000528125 NESP48681 1621 aa25.45■■□□□ 1.66
C11orf1-202ENST00000528125 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
C11orf1-202ENST00000528125 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
C11orf1-202ENST00000528125 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
C11orf1-202ENST00000528125 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
C11orf1-202ENST00000528125 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
C11orf1-202ENST00000528125 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
C11orf1-202ENST00000528125 LAMC3Q9Y6N6 1575 aa25.09■■□□□ 1.61
C11orf1-202ENST00000528125 KIF21AQ7Z4S6 1674 aa25.06■■□□□ 1.6
C11orf1-202ENST00000528125 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
C11orf1-202ENST00000528125 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
C11orf1-202ENST00000528125 PDS5BQ9NTI5 1447 aa24.94■■□□□ 1.58
C11orf1-202ENST00000528125 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
C11orf1-202ENST00000528125 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
C11orf1-202ENST00000528125 WDR62O43379 1518 aa24.8■■□□□ 1.56
C11orf1-202ENST00000528125 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
C11orf1-202ENST00000528125 OSCARQ8IYS5 282 aa24.57■■□□□ 1.52
C11orf1-202ENST00000528125 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
C11orf1-202ENST00000528125 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
C11orf1-202ENST00000528125 WIZO95785 1651 aa24.47■■□□□ 1.51
C11orf1-202ENST00000528125 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
C11orf1-202ENST00000528125 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
C11orf1-202ENST00000528125 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
C11orf1-202ENST00000528125 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
C11orf1-202ENST00000528125 CFTRP13569 1480 aa24.38■■□□□ 1.49
C11orf1-202ENST00000528125 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
C11orf1-202ENST00000528125 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
C11orf1-202ENST00000528125 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
C11orf1-202ENST00000528125 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
C11orf1-202ENST00000528125 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
C11orf1-202ENST00000528125 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
C11orf1-202ENST00000528125 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
C11orf1-202ENST00000528125 ARAP1Q96P48 1450 aa24■■□□□ 1.43
C11orf1-202ENST00000528125 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
C11orf1-202ENST00000528125 TOPBP1Q92547 1522 aa23.98■■□□□ 1.43
C11orf1-202ENST00000528125 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
C11orf1-202ENST00000528125 CHD1O14646 1710 aa23.93■■□□□ 1.42
C11orf1-202ENST00000528125 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
C11orf1-202ENST00000528125 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
C11orf1-202ENST00000528125 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
C11orf1-202ENST00000528125 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
C11orf1-202ENST00000528125 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
C11orf1-202ENST00000528125 FBLN2P98095 1184 aa23.75■■□□□ 1.39
C11orf1-202ENST00000528125 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
C11orf1-202ENST00000528125 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
C11orf1-202ENST00000528125 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
C11orf1-202ENST00000528125 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
C11orf1-202ENST00000528125 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
C11orf1-202ENST00000528125 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
C11orf1-202ENST00000528125 SOGA1O94964 1423 aa23.53■■□□□ 1.36
C11orf1-202ENST00000528125 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
C11orf1-202ENST00000528125 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
C11orf1-202ENST00000528125 CHMP7Q8WUX9 453 aaPredicted RBP23.47■■□□□ 1.35
C11orf1-202ENST00000528125 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
C11orf1-202ENST00000528125 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
C11orf1-202ENST00000528125 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
C11orf1-202ENST00000528125 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
C11orf1-202ENST00000528125 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
C11orf1-202ENST00000528125 CUX1P39880 1505 aa23.36■■□□□ 1.33
C11orf1-202ENST00000528125 ERCC6L2Q5T890 1561 aa23.29■■□□□ 1.32
C11orf1-202ENST00000528125 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
C11orf1-202ENST00000528125 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
C11orf1-202ENST00000528125 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
C11orf1-202ENST00000528125 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
C11orf1-202ENST00000528125 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
C11orf1-202ENST00000528125 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
C11orf1-202ENST00000528125 NUP160Q12769 1436 aa23.1■■□□□ 1.29
C11orf1-202ENST00000528125 SHROOM2Q13796 1616 aa23.07■■□□□ 1.28
C11orf1-202ENST00000528125 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
C11orf1-202ENST00000528125 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
C11orf1-202ENST00000528125 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
C11orf1-202ENST00000528125 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
C11orf1-202ENST00000528125 KDM4FA0A1W2PPD8 638 aa22.89■■□□□ 1.25
C11orf1-202ENST00000528125 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
C11orf1-202ENST00000528125 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
C11orf1-202ENST00000528125 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
C11orf1-202ENST00000528125 ILDR1Q86SU0 546 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms