RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
SDHD-205ENST00000528048 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
SDHD-205ENST00000528048 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
SDHD-205ENST00000528048 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
SDHD-205ENST00000528048 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
SDHD-205ENST00000528048 ABCC9O60706 1549 aa25.46■■□□□ 1.67
SDHD-205ENST00000528048 PHF23Q9BUL5 403 aaPredicted RBP25.4■■□□□ 1.66
SDHD-205ENST00000528048 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
SDHD-205ENST00000528048 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
SDHD-205ENST00000528048 NACADO15069 1562 aa24.33■■□□□ 1.49
SDHD-205ENST00000528048 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
SDHD-205ENST00000528048 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
SDHD-205ENST00000528048 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
SDHD-205ENST00000528048 FOXD1Q16676 465 aa24■■□□□ 1.43
SDHD-205ENST00000528048 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
SDHD-205ENST00000528048 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
SDHD-205ENST00000528048 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
SDHD-205ENST00000528048 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
SDHD-205ENST00000528048 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
SDHD-205ENST00000528048 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SDHD-205ENST00000528048 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
SDHD-205ENST00000528048 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
SDHD-205ENST00000528048 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
SDHD-205ENST00000528048 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
SDHD-205ENST00000528048 MSH5O43196 834 aa22.62■■□□□ 1.21
SDHD-205ENST00000528048 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
SDHD-205ENST00000528048 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
SDHD-205ENST00000528048 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
SDHD-205ENST00000528048 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
SDHD-205ENST00000528048 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
SDHD-205ENST00000528048 PIAS4Q8N2W9 510 aaPredicted RBP22.44■■□□□ 1.18
SDHD-205ENST00000528048 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
SDHD-205ENST00000528048 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
SDHD-205ENST00000528048 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
SDHD-205ENST00000528048 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
SDHD-205ENST00000528048 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
SDHD-205ENST00000528048 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
SDHD-205ENST00000528048 ADRA2BP18089 450 aa22.21■■□□□ 1.15
SDHD-205ENST00000528048 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
SDHD-205ENST00000528048 WIZO95785 1651 aa22.05■■□□□ 1.12
SDHD-205ENST00000528048 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
SDHD-205ENST00000528048 NESP48681 1621 aa21.95■■□□□ 1.1
SDHD-205ENST00000528048 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
SDHD-205ENST00000528048 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SDHD-205ENST00000528048 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
SDHD-205ENST00000528048 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
SDHD-205ENST00000528048 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
SDHD-205ENST00000528048 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
SDHD-205ENST00000528048 CUX2O14529 1486 aa21.72■■□□□ 1.07
SDHD-205ENST00000528048 CFTRP13569 1480 aa21.71■■□□□ 1.07
SDHD-205ENST00000528048 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
SDHD-205ENST00000528048 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
SDHD-205ENST00000528048 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
SDHD-205ENST00000528048 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
SDHD-205ENST00000528048 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
SDHD-205ENST00000528048 WDR62O43379 1518 aa21.4■■□□□ 1.02
SDHD-205ENST00000528048 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
SDHD-205ENST00000528048 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
SDHD-205ENST00000528048 ABCC8Q09428 1581 aa21.29■■□□□ 1
SDHD-205ENST00000528048 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
SDHD-205ENST00000528048 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
SDHD-205ENST00000528048 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
SDHD-205ENST00000528048 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
SDHD-205ENST00000528048 SOGA1O94964 1423 aa21.08■□□□□ 0.97
SDHD-205ENST00000528048 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
SDHD-205ENST00000528048 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
SDHD-205ENST00000528048 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
SDHD-205ENST00000528048 CUX1P39880 1505 aa20.99■□□□□ 0.95
SDHD-205ENST00000528048 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
SDHD-205ENST00000528048 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SDHD-205ENST00000528048 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
SDHD-205ENST00000528048 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.957e-7■■□□□ 14.1
SDHD-205ENST00000528048 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
SDHD-205ENST00000528048 FBLN2P98095 1184 aa20.92■□□□□ 0.94
SDHD-205ENST00000528048 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
SDHD-205ENST00000528048 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
SDHD-205ENST00000528048 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
SDHD-205ENST00000528048 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
SDHD-205ENST00000528048 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
SDHD-205ENST00000528048 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
SDHD-205ENST00000528048 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
SDHD-205ENST00000528048 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
SDHD-205ENST00000528048 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
SDHD-205ENST00000528048 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
SDHD-205ENST00000528048 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
SDHD-205ENST00000528048 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
SDHD-205ENST00000528048 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
SDHD-205ENST00000528048 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
SDHD-205ENST00000528048 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
SDHD-205ENST00000528048 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
SDHD-205ENST00000528048 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
SDHD-205ENST00000528048 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
SDHD-205ENST00000528048 IGF1RP08069 1367 aa20.49■□□□□ 0.87
SDHD-205ENST00000528048 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
SDHD-205ENST00000528048 CHD1O14646 1710 aa20.47■□□□□ 0.87
SDHD-205ENST00000528048 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
SDHD-205ENST00000528048 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
SDHD-205ENST00000528048 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
SDHD-205ENST00000528048 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
SDHD-205ENST00000528048 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms