RNA–Protein interactions for RNA: ENST00000527907.5

ATG13-209, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-209ENST00000527907 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
ATG13-209ENST00000527907 ABCC9O60706 1549 aa21.2■□□□□ 0.98
ATG13-209ENST00000527907 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
ATG13-209ENST00000527907 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
ATG13-209ENST00000527907 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
ATG13-209ENST00000527907 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATG13-209ENST00000527907 NACADO15069 1562 aa19.54■□□□□ 0.72
ATG13-209ENST00000527907 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
ATG13-209ENST00000527907 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
ATG13-209ENST00000527907 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
ATG13-209ENST00000527907 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
ATG13-209ENST00000527907 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
ATG13-209ENST00000527907 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
ATG13-209ENST00000527907 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
ATG13-209ENST00000527907 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
ATG13-209ENST00000527907 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
ATG13-209ENST00000527907 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
ATG13-209ENST00000527907 CUX2O14529 1486 aa18.56■□□□□ 0.56
ATG13-209ENST00000527907 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
ATG13-209ENST00000527907 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
ATG13-209ENST00000527907 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
ATG13-209ENST00000527907 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
ATG13-209ENST00000527907 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
ATG13-209ENST00000527907 NESP48681 1621 aa18.01■□□□□ 0.47
ATG13-209ENST00000527907 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
ATG13-209ENST00000527907 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
ATG13-209ENST00000527907 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
ATG13-209ENST00000527907 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
ATG13-209ENST00000527907 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
ATG13-209ENST00000527907 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
ATG13-209ENST00000527907 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
ATG13-209ENST00000527907 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
ATG13-209ENST00000527907 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
ATG13-209ENST00000527907 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
ATG13-209ENST00000527907 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
ATG13-209ENST00000527907 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
ATG13-209ENST00000527907 WDR62O43379 1518 aa17.55■□□□□ 0.4
ATG13-209ENST00000527907 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
ATG13-209ENST00000527907 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
ATG13-209ENST00000527907 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
ATG13-209ENST00000527907 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
ATG13-209ENST00000527907 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
ATG13-209ENST00000527907 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
ATG13-209ENST00000527907 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.37
ATG13-209ENST00000527907 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
ATG13-209ENST00000527907 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
ATG13-209ENST00000527907 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
ATG13-209ENST00000527907 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
ATG13-209ENST00000527907 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
ATG13-209ENST00000527907 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
ATG13-209ENST00000527907 CFTRP13569 1480 aa17.13■□□□□ 0.33
ATG13-209ENST00000527907 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
ATG13-209ENST00000527907 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
ATG13-209ENST00000527907 WIZO95785 1651 aa17.07■□□□□ 0.32
ATG13-209ENST00000527907 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
ATG13-209ENST00000527907 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
ATG13-209ENST00000527907 CHD1O14646 1710 aa16.95■□□□□ 0.3
ATG13-209ENST00000527907 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
ATG13-209ENST00000527907 FBLN2P98095 1184 aa16.9■□□□□ 0.3
ATG13-209ENST00000527907 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
ATG13-209ENST00000527907 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG13-209ENST00000527907 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
ATG13-209ENST00000527907 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
ATG13-209ENST00000527907 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
ATG13-209ENST00000527907 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
ATG13-209ENST00000527907 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
ATG13-209ENST00000527907 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
ATG13-209ENST00000527907 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
ATG13-209ENST00000527907 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
ATG13-209ENST00000527907 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
ATG13-209ENST00000527907 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
ATG13-209ENST00000527907 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
ATG13-209ENST00000527907 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
ATG13-209ENST00000527907 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
ATG13-209ENST00000527907 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
ATG13-209ENST00000527907 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
ATG13-209ENST00000527907 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
ATG13-209ENST00000527907 SOGA1O94964 1423 aa16.58■□□□□ 0.24
ATG13-209ENST00000527907 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
ATG13-209ENST00000527907 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
ATG13-209ENST00000527907 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
ATG13-209ENST00000527907 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
ATG13-209ENST00000527907 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
ATG13-209ENST00000527907 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
ATG13-209ENST00000527907 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
ATG13-209ENST00000527907 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
ATG13-209ENST00000527907 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
ATG13-209ENST00000527907 CUX1P39880 1505 aa16.33■□□□□ 0.2
ATG13-209ENST00000527907 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
ATG13-209ENST00000527907 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
ATG13-209ENST00000527907 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
ATG13-209ENST00000527907 NUP160Q12769 1436 aa16.28■□□□□ 0.2
ATG13-209ENST00000527907 KDM6BO15054 1643 aa16.26■□□□□ 0.19
ATG13-209ENST00000527907 SHROOM2Q13796 1616 aa16.26■□□□□ 0.19
ATG13-209ENST00000527907 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
ATG13-209ENST00000527907 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
ATG13-209ENST00000527907 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
ATG13-209ENST00000527907 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
ATG13-209ENST00000527907 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
ATG13-209ENST00000527907 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms