RNA–Protein interactions for RNA: ENST00000525659.5

CSF1-207, Transcript of colony stimulating factor 1, humanhuman

TSL 4

Gene CSF1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-207ENST00000525659 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
CSF1-207ENST00000525659 ABCC9O60706 1549 aa38.82■■■■□ 3.8
CSF1-207ENST00000525659 CCDC180Q9P1Z9 1646 aa37.79■■■■□ 3.64
CSF1-207ENST00000525659 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
CSF1-207ENST00000525659 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
CSF1-207ENST00000525659 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
CSF1-207ENST00000525659 NACADO15069 1562 aa35.96■■■■□ 3.35
CSF1-207ENST00000525659 UNC13AQ9UPW8 1703 aa35.69■■■■□ 3.3
CSF1-207ENST00000525659 DCAF8L2P0C7V8 631 aa35.67■■■■□ 3.3
CSF1-207ENST00000525659 BICRAQ9NZM4 1560 aa35.55■■■■□ 3.28
CSF1-207ENST00000525659 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
CSF1-207ENST00000525659 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
CSF1-207ENST00000525659 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
CSF1-207ENST00000525659 DNAJC5Q9H3Z4 198 aa34.81■■■■□ 3.16
CSF1-207ENST00000525659 SHROOM4Q9ULL8 1493 aa34.76■■■■□ 3.15
CSF1-207ENST00000525659 EIF4G1Q04637 1599 aaKnown RBP34.68■■■■□ 3.14
CSF1-207ENST00000525659 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
CSF1-207ENST00000525659 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
CSF1-207ENST00000525659 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
CSF1-207ENST00000525659 CUX2O14529 1486 aa33.71■■■□□ 2.99
CSF1-207ENST00000525659 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
CSF1-207ENST00000525659 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
CSF1-207ENST00000525659 NESP48681 1621 aa33.13■■■□□ 2.89
CSF1-207ENST00000525659 ATAD2BQ9ULI0 1458 aa33.07■■■□□ 2.88
CSF1-207ENST00000525659 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
CSF1-207ENST00000525659 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
CSF1-207ENST00000525659 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
CSF1-207ENST00000525659 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
CSF1-207ENST00000525659 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
CSF1-207ENST00000525659 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
CSF1-207ENST00000525659 LAMC3Q9Y6N6 1575 aa32.6■■■□□ 2.81
CSF1-207ENST00000525659 KIF21AQ7Z4S6 1674 aa32.59■■■□□ 2.81
CSF1-207ENST00000525659 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
CSF1-207ENST00000525659 PDS5BQ9NTI5 1447 aa32.44■■■□□ 2.78
CSF1-207ENST00000525659 BAZ1AQ9NRL2 1556 aaPredicted RBP32.43■■■□□ 2.78
CSF1-207ENST00000525659 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
CSF1-207ENST00000525659 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
CSF1-207ENST00000525659 WDR62O43379 1518 aa32.22■■■□□ 2.75
CSF1-207ENST00000525659 CADPSQ9ULU8 1353 aa32.21■■■□□ 2.75
CSF1-207ENST00000525659 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
CSF1-207ENST00000525659 CEP164Q9UPV0 1460 aa31.93■■■□□ 2.7
CSF1-207ENST00000525659 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
CSF1-207ENST00000525659 WIZO95785 1651 aa31.8■■■□□ 2.68
CSF1-207ENST00000525659 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
CSF1-207ENST00000525659 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
CSF1-207ENST00000525659 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
CSF1-207ENST00000525659 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
CSF1-207ENST00000525659 CFTRP13569 1480 aa31.66■■■□□ 2.66
CSF1-207ENST00000525659 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
CSF1-207ENST00000525659 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
CSF1-207ENST00000525659 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
CSF1-207ENST00000525659 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
CSF1-207ENST00000525659 TRHP20396 242 aaPredicted RBP31.31■■■□□ 2.6
CSF1-207ENST00000525659 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
CSF1-207ENST00000525659 ARAP1Q96P48 1450 aa31.25■■■□□ 2.59
CSF1-207ENST00000525659 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
CSF1-207ENST00000525659 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
CSF1-207ENST00000525659 PRDM2Q13029 1718 aa31.18■■■□□ 2.58
CSF1-207ENST00000525659 TOPBP1Q92547 1522 aa31.17■■■□□ 2.58
CSF1-207ENST00000525659 CHD1O14646 1710 aa31.12■■■□□ 2.57
CSF1-207ENST00000525659 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.574e-6■■■■□ 26.2
CSF1-207ENST00000525659 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
CSF1-207ENST00000525659 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
CSF1-207ENST00000525659 FBLN2P98095 1184 aa30.98■■■□□ 2.55
CSF1-207ENST00000525659 TARBP1Q13395 1621 aaKnown RBP30.97■■■□□ 2.55
CSF1-207ENST00000525659 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
CSF1-207ENST00000525659 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
CSF1-207ENST00000525659 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
CSF1-207ENST00000525659 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
CSF1-207ENST00000525659 RAD54L2Q9Y4B4 1467 aa30.76■■■□□ 2.51
CSF1-207ENST00000525659 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
CSF1-207ENST00000525659 SNAPC4Q5SXM2 1469 aa30.69■■■□□ 2.5
CSF1-207ENST00000525659 SOGA1O94964 1423 aa30.62■■■□□ 2.49
CSF1-207ENST00000525659 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
CSF1-207ENST00000525659 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.48
CSF1-207ENST00000525659 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
CSF1-207ENST00000525659 GAPVD1Q14C86 1478 aa30.49■■■□□ 2.47
CSF1-207ENST00000525659 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
CSF1-207ENST00000525659 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
CSF1-207ENST00000525659 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
CSF1-207ENST00000525659 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
CSF1-207ENST00000525659 CUX1P39880 1505 aa30.34■■■□□ 2.45
CSF1-207ENST00000525659 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.45
CSF1-207ENST00000525659 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
CSF1-207ENST00000525659 ABCA5Q8WWZ7 1642 aa30.1■■■□□ 2.41
CSF1-207ENST00000525659 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
CSF1-207ENST00000525659 KIF13AQ9H1H9 1805 aa30.08■■■□□ 2.41
CSF1-207ENST00000525659 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
CSF1-207ENST00000525659 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
CSF1-207ENST00000525659 NUP160Q12769 1436 aa30.01■■■□□ 2.39
CSF1-207ENST00000525659 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
CSF1-207ENST00000525659 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
CSF1-207ENST00000525659 KDM4FA0A1W2PPD8 638 aa29.89■■■□□ 2.38
CSF1-207ENST00000525659 ILDR1Q86SU0 546 aaPredicted RBP29.89■■■□□ 2.38
CSF1-207ENST00000525659 FAM69CQ0P6D2 419 aa29.82■■■□□ 2.36
CSF1-207ENST00000525659 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
CSF1-207ENST00000525659 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
CSF1-207ENST00000525659 FHAD1B1AJZ9 1412 aa29.78■■■□□ 2.36
CSF1-207ENST00000525659 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CSF1-207ENST00000525659 DIP2BQ9P265 1576 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms