RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 NISCHQ9Y2I1 1504 aa14.84□□□□□ -0.03
ATPAF1-207ENST00000525633 ABCC9O60706 1549 aa13.13□□□□□ -0.31
ATPAF1-207ENST00000525633 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
ATPAF1-207ENST00000525633 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
ATPAF1-207ENST00000525633 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
ATPAF1-207ENST00000525633 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
ATPAF1-207ENST00000525633 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.42
ATPAF1-207ENST00000525633 NACADO15069 1562 aa12.37□□□□□ -0.43
ATPAF1-207ENST00000525633 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATPAF1-207ENST00000525633 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
ATPAF1-207ENST00000525633 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
ATPAF1-207ENST00000525633 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
ATPAF1-207ENST00000525633 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.49
ATPAF1-207ENST00000525633 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
ATPAF1-207ENST00000525633 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
ATPAF1-207ENST00000525633 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
ATPAF1-207ENST00000525633 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
ATPAF1-207ENST00000525633 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
ATPAF1-207ENST00000525633 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
ATPAF1-207ENST00000525633 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
ATPAF1-207ENST00000525633 BAZ1AQ9NRL2 1556 aaPredicted RBP11.48□□□□□ -0.57
ATPAF1-207ENST00000525633 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.57
ATPAF1-207ENST00000525633 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
ATPAF1-207ENST00000525633 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
ATPAF1-207ENST00000525633 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
ATPAF1-207ENST00000525633 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
ATPAF1-207ENST00000525633 WIZO95785 1651 aa11.4□□□□□ -0.58
ATPAF1-207ENST00000525633 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
ATPAF1-207ENST00000525633 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
ATPAF1-207ENST00000525633 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
ATPAF1-207ENST00000525633 CUX2O14529 1486 aa11.31□□□□□ -0.6
ATPAF1-207ENST00000525633 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
ATPAF1-207ENST00000525633 BAZ1BQ9UIG0 1483 aaKnown RBP11.29□□□□□ -0.6
ATPAF1-207ENST00000525633 NESP48681 1621 aa11.27□□□□□ -0.61
ATPAF1-207ENST00000525633 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
ATPAF1-207ENST00000525633 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
ATPAF1-207ENST00000525633 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
ATPAF1-207ENST00000525633 LAMC3Q9Y6N6 1575 aa11.13□□□□□ -0.63
ATPAF1-207ENST00000525633 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
ATPAF1-207ENST00000525633 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
ATPAF1-207ENST00000525633 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
ATPAF1-207ENST00000525633 PRDM2Q13029 1718 aa11□□□□□ -0.65
ATPAF1-207ENST00000525633 CFTRP13569 1480 aa11□□□□□ -0.65
ATPAF1-207ENST00000525633 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
ATPAF1-207ENST00000525633 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
ATPAF1-207ENST00000525633 KIF21AQ7Z4S6 1674 aa10.96□□□□□ -0.65
ATPAF1-207ENST00000525633 WDR62O43379 1518 aa10.96□□□□□ -0.65
ATPAF1-207ENST00000525633 TRIM41Q8WV44 630 aa10.91□□□□□ -0.66
ATPAF1-207ENST00000525633 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
ATPAF1-207ENST00000525633 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
ATPAF1-207ENST00000525633 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
ATPAF1-207ENST00000525633 CHIC1Q5VXU3 224 aa10.79□□□□□ -0.68
ATPAF1-207ENST00000525633 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
ATPAF1-207ENST00000525633 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
ATPAF1-207ENST00000525633 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
ATPAF1-207ENST00000525633 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
ATPAF1-207ENST00000525633 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
ATPAF1-207ENST00000525633 CUX1P39880 1505 aa10.74□□□□□ -0.69
ATPAF1-207ENST00000525633 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
ATPAF1-207ENST00000525633 DNMBPQ6XZF7 1577 aa10.73□□□□□ -0.69
ATPAF1-207ENST00000525633 TOP2BQ02880 1626 aa10.72□□□□□ -0.69
ATPAF1-207ENST00000525633 AQRO60306 1485 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATPAF1-207ENST00000525633 FBLN2P98095 1184 aa10.67□□□□□ -0.7
ATPAF1-207ENST00000525633 SOGA1O94964 1423 aa10.67□□□□□ -0.7
ATPAF1-207ENST00000525633 FGD5Q6ZNL6 1462 aa10.66□□□□□ -0.7
ATPAF1-207ENST00000525633 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
ATPAF1-207ENST00000525633 CYB5RLQ6IPT4 315 aa10.65□□□□□ -0.7
ATPAF1-207ENST00000525633 POLA1P09884 1462 aaPredicted RBP10.65□□□□□ -0.7
ATPAF1-207ENST00000525633 RAD54L2Q9Y4B4 1467 aa10.64□□□□□ -0.71
ATPAF1-207ENST00000525633 ARHGEF11O15085 1522 aa10.6□□□□□ -0.71
ATPAF1-207ENST00000525633 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
ATPAF1-207ENST00000525633 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
ATPAF1-207ENST00000525633 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
ATPAF1-207ENST00000525633 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
ATPAF1-207ENST00000525633 RIMBP3CA6NJZ7 1639 aa10.57□□□□□ -0.72
ATPAF1-207ENST00000525633 RIMBP3BA6NNM3 1639 aa10.57□□□□□ -0.72
ATPAF1-207ENST00000525633 RIMBP3Q9UFD9 1639 aa10.57□□□□□ -0.72
ATPAF1-207ENST00000525633 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
ATPAF1-207ENST00000525633 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
ATPAF1-207ENST00000525633 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
ATPAF1-207ENST00000525633 SNAPC4Q5SXM2 1469 aa10.54□□□□□ -0.72
ATPAF1-207ENST00000525633 GRIN2BQ13224 1484 aa10.53□□□□□ -0.72
ATPAF1-207ENST00000525633 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
ATPAF1-207ENST00000525633 KIF27Q86VH2 1401 aa10.51□□□□□ -0.73
ATPAF1-207ENST00000525633 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
ATPAF1-207ENST00000525633 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
ATPAF1-207ENST00000525633 MAGI1Q96QZ7 1491 aaPredicted RBP10.5□□□□□ -0.73
ATPAF1-207ENST00000525633 ABCA5Q8WWZ7 1642 aa10.5□□□□□ -0.73
ATPAF1-207ENST00000525633 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
ATPAF1-207ENST00000525633 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
ATPAF1-207ENST00000525633 EEA1Q15075 1411 aa10.47□□□□□ -0.73
ATPAF1-207ENST00000525633 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
ATPAF1-207ENST00000525633 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
ATPAF1-207ENST00000525633 EHMT2Q96KQ7 1210 aa10.44□□□□□ -0.74
ATPAF1-207ENST00000525633 CHD1O14646 1710 aa10.44□□□□□ -0.74
ATPAF1-207ENST00000525633 IGF1RP08069 1367 aa10.43□□□□□ -0.74
ATPAF1-207ENST00000525633 CUL7Q14999 1698 aa10.42□□□□□ -0.74
ATPAF1-207ENST00000525633 ERICH3Q5RHP9 1530 aa10.42□□□□□ -0.74
ATPAF1-207ENST00000525633 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
ATPAF1-207ENST00000525633 KIF21BO75037 1637 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms