RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
CCNC-218ENST00000524049 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
CCNC-218ENST00000524049 ABCC9O60706 1549 aa26.57■■□□□ 1.84
CCNC-218ENST00000524049 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
CCNC-218ENST00000524049 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
CCNC-218ENST00000524049 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
CCNC-218ENST00000524049 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
CCNC-218ENST00000524049 NACADO15069 1562 aa24.99■■□□□ 1.59
CCNC-218ENST00000524049 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
CCNC-218ENST00000524049 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
CCNC-218ENST00000524049 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
CCNC-218ENST00000524049 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
CCNC-218ENST00000524049 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
CCNC-218ENST00000524049 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
CCNC-218ENST00000524049 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CCNC-218ENST00000524049 ZCCHC6Q5VYS8 1495 aaKnown RBP24.12■■□□□ 1.45
CCNC-218ENST00000524049 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
CCNC-218ENST00000524049 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
CCNC-218ENST00000524049 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
CCNC-218ENST00000524049 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
CCNC-218ENST00000524049 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
CCNC-218ENST00000524049 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
CCNC-218ENST00000524049 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
CCNC-218ENST00000524049 CUX2O14529 1486 aa23.11■■□□□ 1.29
CCNC-218ENST00000524049 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
CCNC-218ENST00000524049 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
CCNC-218ENST00000524049 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
CCNC-218ENST00000524049 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
CCNC-218ENST00000524049 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
CCNC-218ENST00000524049 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
CCNC-218ENST00000524049 NESP48681 1621 aa22.71■■□□□ 1.23
CCNC-218ENST00000524049 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
CCNC-218ENST00000524049 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
CCNC-218ENST00000524049 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
CCNC-218ENST00000524049 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
CCNC-218ENST00000524049 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
CCNC-218ENST00000524049 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
CCNC-218ENST00000524049 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
CCNC-218ENST00000524049 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
CCNC-218ENST00000524049 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.16
CCNC-218ENST00000524049 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CCNC-218ENST00000524049 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
CCNC-218ENST00000524049 WDR62O43379 1518 aa22.21■■□□□ 1.15
CCNC-218ENST00000524049 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
CCNC-218ENST00000524049 WIZO95785 1651 aa22.11■■□□□ 1.13
CCNC-218ENST00000524049 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
CCNC-218ENST00000524049 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
CCNC-218ENST00000524049 CFTRP13569 1480 aa22.05■■□□□ 1.12
CCNC-218ENST00000524049 FOXD1Q16676 465 aa21.98■■□□□ 1.11
CCNC-218ENST00000524049 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
CCNC-218ENST00000524049 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
CCNC-218ENST00000524049 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
CCNC-218ENST00000524049 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
CCNC-218ENST00000524049 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
CCNC-218ENST00000524049 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
CCNC-218ENST00000524049 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
CCNC-218ENST00000524049 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
CCNC-218ENST00000524049 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
CCNC-218ENST00000524049 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
CCNC-218ENST00000524049 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
CCNC-218ENST00000524049 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
CCNC-218ENST00000524049 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
CCNC-218ENST00000524049 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
CCNC-218ENST00000524049 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
CCNC-218ENST00000524049 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
CCNC-218ENST00000524049 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
CCNC-218ENST00000524049 FBLN2P98095 1184 aa21.42■■□□□ 1.02
CCNC-218ENST00000524049 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
CCNC-218ENST00000524049 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
CCNC-218ENST00000524049 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
CCNC-218ENST00000524049 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
CCNC-218ENST00000524049 SOGA1O94964 1423 aa21.34■■□□□ 1.01
CCNC-218ENST00000524049 CHD1O14646 1710 aa21.31■■□□□ 1
CCNC-218ENST00000524049 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
CCNC-218ENST00000524049 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
CCNC-218ENST00000524049 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
CCNC-218ENST00000524049 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
CCNC-218ENST00000524049 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
CCNC-218ENST00000524049 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
CCNC-218ENST00000524049 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
CCNC-218ENST00000524049 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
CCNC-218ENST00000524049 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
CCNC-218ENST00000524049 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
CCNC-218ENST00000524049 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
CCNC-218ENST00000524049 CUX1P39880 1505 aa21.1■□□□□ 0.97
CCNC-218ENST00000524049 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
CCNC-218ENST00000524049 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
CCNC-218ENST00000524049 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
CCNC-218ENST00000524049 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
CCNC-218ENST00000524049 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
CCNC-218ENST00000524049 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
CCNC-218ENST00000524049 NUP160Q12769 1436 aa20.83■□□□□ 0.93
CCNC-218ENST00000524049 MSH5O43196 834 aa20.81■□□□□ 0.92
CCNC-218ENST00000524049 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
CCNC-218ENST00000524049 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
CCNC-218ENST00000524049 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
CCNC-218ENST00000524049 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
CCNC-218ENST00000524049 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
CCNC-218ENST00000524049 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
CCNC-218ENST00000524049 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms