RNA–Protein interactions for RNA: ENST00000524039.5

GSDMB-215, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 1,100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-215ENST00000524039 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
GSDMB-215ENST00000524039 ABCC9O60706 1549 aa18.8■□□□□ 0.6
GSDMB-215ENST00000524039 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
GSDMB-215ENST00000524039 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
GSDMB-215ENST00000524039 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
GSDMB-215ENST00000524039 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.386e-8■■□□□ 14
GSDMB-215ENST00000524039 NACADO15069 1562 aa17.33■□□□□ 0.37
GSDMB-215ENST00000524039 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
GSDMB-215ENST00000524039 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
GSDMB-215ENST00000524039 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
GSDMB-215ENST00000524039 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
GSDMB-215ENST00000524039 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
GSDMB-215ENST00000524039 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
GSDMB-215ENST00000524039 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
GSDMB-215ENST00000524039 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
GSDMB-215ENST00000524039 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
GSDMB-215ENST00000524039 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
GSDMB-215ENST00000524039 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
GSDMB-215ENST00000524039 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
GSDMB-215ENST00000524039 CUX2O14529 1486 aa16.39■□□□□ 0.21
GSDMB-215ENST00000524039 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
GSDMB-215ENST00000524039 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
GSDMB-215ENST00000524039 NESP48681 1621 aa15.99■□□□□ 0.15
GSDMB-215ENST00000524039 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
GSDMB-215ENST00000524039 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
GSDMB-215ENST00000524039 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
GSDMB-215ENST00000524039 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
GSDMB-215ENST00000524039 HMGXB3Q12766 1538 aa15.83■□□□□ 0.12
GSDMB-215ENST00000524039 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
GSDMB-215ENST00000524039 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
GSDMB-215ENST00000524039 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
GSDMB-215ENST00000524039 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
GSDMB-215ENST00000524039 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
GSDMB-215ENST00000524039 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
GSDMB-215ENST00000524039 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
GSDMB-215ENST00000524039 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
GSDMB-215ENST00000524039 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
GSDMB-215ENST00000524039 WDR62O43379 1518 aa15.55■□□□□ 0.08
GSDMB-215ENST00000524039 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
GSDMB-215ENST00000524039 RIMBP3CA6NJZ7 1639 aa15.48■□□□□ 0.07
GSDMB-215ENST00000524039 RIMBP3BA6NNM3 1639 aa15.48■□□□□ 0.07
GSDMB-215ENST00000524039 RIMBP3Q9UFD9 1639 aa15.48■□□□□ 0.07
GSDMB-215ENST00000524039 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
GSDMB-215ENST00000524039 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
GSDMB-215ENST00000524039 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
GSDMB-215ENST00000524039 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
GSDMB-215ENST00000524039 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
GSDMB-215ENST00000524039 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
GSDMB-215ENST00000524039 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
GSDMB-215ENST00000524039 WIZO95785 1651 aa15.26■□□□□ 0.03
GSDMB-215ENST00000524039 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
GSDMB-215ENST00000524039 CFTRP13569 1480 aa15.18■□□□□ 0.02
GSDMB-215ENST00000524039 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
GSDMB-215ENST00000524039 CHD1O14646 1710 aa15.13■□□□□ 0.01
GSDMB-215ENST00000524039 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
GSDMB-215ENST00000524039 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
GSDMB-215ENST00000524039 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
GSDMB-215ENST00000524039 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
GSDMB-215ENST00000524039 FBLN2P98095 1184 aa15.02■□□□□ -0
GSDMB-215ENST00000524039 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
GSDMB-215ENST00000524039 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
GSDMB-215ENST00000524039 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
GSDMB-215ENST00000524039 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
GSDMB-215ENST00000524039 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
GSDMB-215ENST00000524039 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
GSDMB-215ENST00000524039 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
GSDMB-215ENST00000524039 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
GSDMB-215ENST00000524039 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
GSDMB-215ENST00000524039 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
GSDMB-215ENST00000524039 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
GSDMB-215ENST00000524039 SNAPC4Q5SXM2 1469 aa14.78□□□□□ -0.04
GSDMB-215ENST00000524039 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
GSDMB-215ENST00000524039 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
GSDMB-215ENST00000524039 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
GSDMB-215ENST00000524039 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
GSDMB-215ENST00000524039 SOGA1O94964 1423 aa14.72□□□□□ -0.05
GSDMB-215ENST00000524039 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
GSDMB-215ENST00000524039 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
GSDMB-215ENST00000524039 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
GSDMB-215ENST00000524039 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
GSDMB-215ENST00000524039 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
GSDMB-215ENST00000524039 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
GSDMB-215ENST00000524039 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
GSDMB-215ENST00000524039 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
GSDMB-215ENST00000524039 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
GSDMB-215ENST00000524039 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
GSDMB-215ENST00000524039 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
GSDMB-215ENST00000524039 CUX1P39880 1505 aa14.51□□□□□ -0.09
GSDMB-215ENST00000524039 GRIN2AQ12879 1464 aa14.46□□□□□ -0.09
GSDMB-215ENST00000524039 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
GSDMB-215ENST00000524039 FAM69CQ0P6D2 419 aa14.46□□□□□ -0.09
GSDMB-215ENST00000524039 KDM6BO15054 1643 aa14.45□□□□□ -0.1
GSDMB-215ENST00000524039 SHROOM2Q13796 1616 aa14.45□□□□□ -0.1
GSDMB-215ENST00000524039 TSPOAP1O95153 1857 aa14.44□□□□□ -0.1
GSDMB-215ENST00000524039 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
GSDMB-215ENST00000524039 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
GSDMB-215ENST00000524039 NUP160Q12769 1436 aa14.4□□□□□ -0.1
GSDMB-215ENST00000524039 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
GSDMB-215ENST00000524039 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
GSDMB-215ENST00000524039 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms