RNA–Protein interactions for RNA: ENST00000523722.1

AC002428.1-201, humanhuman

TSL 3 BASIC

Gene AC002428.1, Length 771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002428.1-201ENST00000523722 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
AC002428.1-201ENST00000523722 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
AC002428.1-201ENST00000523722 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
AC002428.1-201ENST00000523722 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
AC002428.1-201ENST00000523722 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
AC002428.1-201ENST00000523722 ABCC9O60706 1549 aa19.22■□□□□ 0.67
AC002428.1-201ENST00000523722 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
AC002428.1-201ENST00000523722 FOXD1Q16676 465 aa18.55■□□□□ 0.56
AC002428.1-201ENST00000523722 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
AC002428.1-201ENST00000523722 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
AC002428.1-201ENST00000523722 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
AC002428.1-201ENST00000523722 NACADO15069 1562 aa18.09■□□□□ 0.49
AC002428.1-201ENST00000523722 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
AC002428.1-201ENST00000523722 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
AC002428.1-201ENST00000523722 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
AC002428.1-201ENST00000523722 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
AC002428.1-201ENST00000523722 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
AC002428.1-201ENST00000523722 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
AC002428.1-201ENST00000523722 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
AC002428.1-201ENST00000523722 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
AC002428.1-201ENST00000523722 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
AC002428.1-201ENST00000523722 MSH5O43196 834 aa17.33■□□□□ 0.36
AC002428.1-201ENST00000523722 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
AC002428.1-201ENST00000523722 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
AC002428.1-201ENST00000523722 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
AC002428.1-201ENST00000523722 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
AC002428.1-201ENST00000523722 ADRA2BP18089 450 aa17.27■□□□□ 0.36
AC002428.1-201ENST00000523722 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
AC002428.1-201ENST00000523722 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
AC002428.1-201ENST00000523722 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
AC002428.1-201ENST00000523722 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
AC002428.1-201ENST00000523722 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
AC002428.1-201ENST00000523722 CUX2O14529 1486 aa16.67■□□□□ 0.26
AC002428.1-201ENST00000523722 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
AC002428.1-201ENST00000523722 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
AC002428.1-201ENST00000523722 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
AC002428.1-201ENST00000523722 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
AC002428.1-201ENST00000523722 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
AC002428.1-201ENST00000523722 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
AC002428.1-201ENST00000523722 NESP48681 1621 aa16.41■□□□□ 0.22
AC002428.1-201ENST00000523722 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
AC002428.1-201ENST00000523722 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
AC002428.1-201ENST00000523722 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
AC002428.1-201ENST00000523722 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
AC002428.1-201ENST00000523722 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
AC002428.1-201ENST00000523722 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
AC002428.1-201ENST00000523722 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
AC002428.1-201ENST00000523722 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
AC002428.1-201ENST00000523722 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
AC002428.1-201ENST00000523722 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
AC002428.1-201ENST00000523722 WDR62O43379 1518 aa16.04■□□□□ 0.16
AC002428.1-201ENST00000523722 WIZO95785 1651 aa16.02■□□□□ 0.16
AC002428.1-201ENST00000523722 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
AC002428.1-201ENST00000523722 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
AC002428.1-201ENST00000523722 CFTRP13569 1480 aa15.97■□□□□ 0.15
AC002428.1-201ENST00000523722 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
AC002428.1-201ENST00000523722 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
AC002428.1-201ENST00000523722 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
AC002428.1-201ENST00000523722 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
AC002428.1-201ENST00000523722 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
AC002428.1-201ENST00000523722 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
AC002428.1-201ENST00000523722 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
AC002428.1-201ENST00000523722 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
AC002428.1-201ENST00000523722 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
AC002428.1-201ENST00000523722 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
AC002428.1-201ENST00000523722 ZNF608Q9ULD9 1512 aaPredicted RBP15.65■□□□□ 0.1
AC002428.1-201ENST00000523722 FBLN2P98095 1184 aa15.64■□□□□ 0.09
AC002428.1-201ENST00000523722 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
AC002428.1-201ENST00000523722 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
AC002428.1-201ENST00000523722 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
AC002428.1-201ENST00000523722 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
AC002428.1-201ENST00000523722 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
AC002428.1-201ENST00000523722 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
AC002428.1-201ENST00000523722 ARHGEF11O15085 1522 aa15.58■□□□□ 0.08
AC002428.1-201ENST00000523722 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
AC002428.1-201ENST00000523722 AQRO60306 1485 aaKnown RBP eCLIP15.56■□□□□ 0.08
AC002428.1-201ENST00000523722 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
AC002428.1-201ENST00000523722 SOGA1O94964 1423 aa15.51■□□□□ 0.07
AC002428.1-201ENST00000523722 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
AC002428.1-201ENST00000523722 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
AC002428.1-201ENST00000523722 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
AC002428.1-201ENST00000523722 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
AC002428.1-201ENST00000523722 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
AC002428.1-201ENST00000523722 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
AC002428.1-201ENST00000523722 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
AC002428.1-201ENST00000523722 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
AC002428.1-201ENST00000523722 CHD1O14646 1710 aa15.38■□□□□ 0.05
AC002428.1-201ENST00000523722 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
AC002428.1-201ENST00000523722 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
AC002428.1-201ENST00000523722 GRIN2BQ13224 1484 aa15.37■□□□□ 0.05
AC002428.1-201ENST00000523722 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
AC002428.1-201ENST00000523722 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
AC002428.1-201ENST00000523722 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
AC002428.1-201ENST00000523722 CUX1P39880 1505 aa15.29■□□□□ 0.04
AC002428.1-201ENST00000523722 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
AC002428.1-201ENST00000523722 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
AC002428.1-201ENST00000523722 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
AC002428.1-201ENST00000523722 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
AC002428.1-201ENST00000523722 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
AC002428.1-201ENST00000523722 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms