RNA–Protein interactions for RNA: ENST00000523611.1

SNX18P27-201, Transcript of sorting nexin 18 pseudogene 27, humanhuman

BASIC

Gene SNX18P27, Length 779 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P27-201ENST00000523611 NISCHQ9Y2I1 1504 aa17.9■□□□□ 0.46
SNX18P27-201ENST00000523611 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
SNX18P27-201ENST00000523611 ABCC9O60706 1549 aa15.41■□□□□ 0.06
SNX18P27-201ENST00000523611 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
SNX18P27-201ENST00000523611 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
SNX18P27-201ENST00000523611 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
SNX18P27-201ENST00000523611 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
SNX18P27-201ENST00000523611 NACADO15069 1562 aa14.8□□□□□ -0.04
SNX18P27-201ENST00000523611 RB1CC1Q8TDY2 1594 aa14.79□□□□□ -0.04
SNX18P27-201ENST00000523611 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
SNX18P27-201ENST00000523611 SCRIBQ14160 1630 aa14.52□□□□□ -0.08
SNX18P27-201ENST00000523611 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
SNX18P27-201ENST00000523611 DNAJC5Q9H3Z4 198 aa14.39□□□□□ -0.11
SNX18P27-201ENST00000523611 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
SNX18P27-201ENST00000523611 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
SNX18P27-201ENST00000523611 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNX18P27-201ENST00000523611 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
SNX18P27-201ENST00000523611 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
SNX18P27-201ENST00000523611 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
SNX18P27-201ENST00000523611 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
SNX18P27-201ENST00000523611 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
SNX18P27-201ENST00000523611 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
SNX18P27-201ENST00000523611 WIZO95785 1651 aa13.72□□□□□ -0.21
SNX18P27-201ENST00000523611 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
SNX18P27-201ENST00000523611 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
SNX18P27-201ENST00000523611 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
SNX18P27-201ENST00000523611 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
SNX18P27-201ENST00000523611 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
SNX18P27-201ENST00000523611 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
SNX18P27-201ENST00000523611 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
SNX18P27-201ENST00000523611 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
SNX18P27-201ENST00000523611 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
SNX18P27-201ENST00000523611 CUX2O14529 1486 aa13.56□□□□□ -0.24
SNX18P27-201ENST00000523611 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
SNX18P27-201ENST00000523611 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
SNX18P27-201ENST00000523611 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
SNX18P27-201ENST00000523611 NESP48681 1621 aa13.28□□□□□ -0.28
SNX18P27-201ENST00000523611 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
SNX18P27-201ENST00000523611 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
SNX18P27-201ENST00000523611 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
SNX18P27-201ENST00000523611 CFTRP13569 1480 aa13.22□□□□□ -0.29
SNX18P27-201ENST00000523611 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
SNX18P27-201ENST00000523611 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
SNX18P27-201ENST00000523611 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
SNX18P27-201ENST00000523611 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
SNX18P27-201ENST00000523611 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
SNX18P27-201ENST00000523611 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
SNX18P27-201ENST00000523611 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
SNX18P27-201ENST00000523611 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
SNX18P27-201ENST00000523611 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
SNX18P27-201ENST00000523611 WDR62O43379 1518 aa12.97□□□□□ -0.33
SNX18P27-201ENST00000523611 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
SNX18P27-201ENST00000523611 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
SNX18P27-201ENST00000523611 CUX1P39880 1505 aa12.95□□□□□ -0.34
SNX18P27-201ENST00000523611 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
SNX18P27-201ENST00000523611 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
SNX18P27-201ENST00000523611 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
SNX18P27-201ENST00000523611 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
SNX18P27-201ENST00000523611 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
SNX18P27-201ENST00000523611 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
SNX18P27-201ENST00000523611 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
SNX18P27-201ENST00000523611 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
SNX18P27-201ENST00000523611 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
SNX18P27-201ENST00000523611 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
SNX18P27-201ENST00000523611 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
SNX18P27-201ENST00000523611 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
SNX18P27-201ENST00000523611 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
SNX18P27-201ENST00000523611 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
SNX18P27-201ENST00000523611 SOGA1O94964 1423 aa12.79□□□□□ -0.36
SNX18P27-201ENST00000523611 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
SNX18P27-201ENST00000523611 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
SNX18P27-201ENST00000523611 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
SNX18P27-201ENST00000523611 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
SNX18P27-201ENST00000523611 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
SNX18P27-201ENST00000523611 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
SNX18P27-201ENST00000523611 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX18P27-201ENST00000523611 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
SNX18P27-201ENST00000523611 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
SNX18P27-201ENST00000523611 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
SNX18P27-201ENST00000523611 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
SNX18P27-201ENST00000523611 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
SNX18P27-201ENST00000523611 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
SNX18P27-201ENST00000523611 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
SNX18P27-201ENST00000523611 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
SNX18P27-201ENST00000523611 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
SNX18P27-201ENST00000523611 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
SNX18P27-201ENST00000523611 CUL7Q14999 1698 aa12.58□□□□□ -0.4
SNX18P27-201ENST00000523611 ADAMTS12P58397 1594 aa12.58□□□□□ -0.4
SNX18P27-201ENST00000523611 EEA1Q15075 1411 aa12.58□□□□□ -0.4
SNX18P27-201ENST00000523611 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
SNX18P27-201ENST00000523611 CHD1O14646 1710 aa12.56□□□□□ -0.4
SNX18P27-201ENST00000523611 IGF1RP08069 1367 aa12.53□□□□□ -0.4
SNX18P27-201ENST00000523611 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
SNX18P27-201ENST00000523611 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
SNX18P27-201ENST00000523611 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
SNX18P27-201ENST00000523611 FBLN2P98095 1184 aa12.5□□□□□ -0.41
SNX18P27-201ENST00000523611 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
SNX18P27-201ENST00000523611 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
SNX18P27-201ENST00000523611 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
SNX18P27-201ENST00000523611 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms