RNA–Protein interactions for RNA: ENST00000522905.1

MCPH1-207, Transcript of microcephalin 1, humanhuman

TSL 2 BASIC

Gene MCPH1, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-207ENST00000522905 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
MCPH1-207ENST00000522905 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
MCPH1-207ENST00000522905 MYT1Q01538 1121 aa19.93■□□□□ 0.78
MCPH1-207ENST00000522905 HRCP23327 699 aa19.83■□□□□ 0.77
MCPH1-207ENST00000522905 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
MCPH1-207ENST00000522905 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
MCPH1-207ENST00000522905 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
MCPH1-207ENST00000522905 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
MCPH1-207ENST00000522905 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
MCPH1-207ENST00000522905 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
MCPH1-207ENST00000522905 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
MCPH1-207ENST00000522905 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.58
MCPH1-207ENST00000522905 ABCC9O60706 1549 aa18.64■□□□□ 0.57
MCPH1-207ENST00000522905 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
MCPH1-207ENST00000522905 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
MCPH1-207ENST00000522905 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
MCPH1-207ENST00000522905 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
MCPH1-207ENST00000522905 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
MCPH1-207ENST00000522905 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
MCPH1-207ENST00000522905 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
MCPH1-207ENST00000522905 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
MCPH1-207ENST00000522905 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
MCPH1-207ENST00000522905 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
MCPH1-207ENST00000522905 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
MCPH1-207ENST00000522905 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.46
MCPH1-207ENST00000522905 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
MCPH1-207ENST00000522905 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
MCPH1-207ENST00000522905 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
MCPH1-207ENST00000522905 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
MCPH1-207ENST00000522905 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
MCPH1-207ENST00000522905 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
MCPH1-207ENST00000522905 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
MCPH1-207ENST00000522905 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
MCPH1-207ENST00000522905 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
MCPH1-207ENST00000522905 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
MCPH1-207ENST00000522905 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
MCPH1-207ENST00000522905 PRKCSHP14314 528 aaPredicted RBP17.31■□□□□ 0.36
MCPH1-207ENST00000522905 NACADO15069 1562 aa17.3■□□□□ 0.36
MCPH1-207ENST00000522905 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
MCPH1-207ENST00000522905 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
MCPH1-207ENST00000522905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
MCPH1-207ENST00000522905 MYT1LQ9UL68 1186 aa17.27■□□□□ 0.36
MCPH1-207ENST00000522905 TSHZ2Q9NRE2 1034 aa17.22■□□□□ 0.35
MCPH1-207ENST00000522905 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
MCPH1-207ENST00000522905 APLP2Q06481 763 aa17.2■□□□□ 0.34
MCPH1-207ENST00000522905 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
MCPH1-207ENST00000522905 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
MCPH1-207ENST00000522905 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
MCPH1-207ENST00000522905 MIER1Q8N108 512 aa17.13■□□□□ 0.33
MCPH1-207ENST00000522905 YTHDC1Q96MU7 727 aaKnown RBP17.11■□□□□ 0.33
MCPH1-207ENST00000522905 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
MCPH1-207ENST00000522905 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
MCPH1-207ENST00000522905 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
MCPH1-207ENST00000522905 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
MCPH1-207ENST00000522905 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
MCPH1-207ENST00000522905 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
MCPH1-207ENST00000522905 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
MCPH1-207ENST00000522905 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
MCPH1-207ENST00000522905 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
MCPH1-207ENST00000522905 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
MCPH1-207ENST00000522905 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
MCPH1-207ENST00000522905 NEFLP07196 543 aa16.69■□□□□ 0.26
MCPH1-207ENST00000522905 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
MCPH1-207ENST00000522905 EEA1Q15075 1411 aa16.66■□□□□ 0.26
MCPH1-207ENST00000522905 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
MCPH1-207ENST00000522905 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
MCPH1-207ENST00000522905 CUX2O14529 1486 aa16.59■□□□□ 0.25
MCPH1-207ENST00000522905 UBE2Q2Q8WVN8 375 aa16.57■□□□□ 0.24
MCPH1-207ENST00000522905 FKBP8Q14318 412 aa16.56■□□□□ 0.24
MCPH1-207ENST00000522905 MSH5O43196 834 aa16.55■□□□□ 0.24
MCPH1-207ENST00000522905 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
MCPH1-207ENST00000522905 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
MCPH1-207ENST00000522905 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
MCPH1-207ENST00000522905 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
MCPH1-207ENST00000522905 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
MCPH1-207ENST00000522905 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
MCPH1-207ENST00000522905 GOLGA3Q08378 1498 aa16.38■□□□□ 0.21
MCPH1-207ENST00000522905 BCANQ96GW7 911 aa16.36■□□□□ 0.21
MCPH1-207ENST00000522905 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
MCPH1-207ENST00000522905 WIZO95785 1651 aa16.35■□□□□ 0.21
MCPH1-207ENST00000522905 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
MCPH1-207ENST00000522905 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
MCPH1-207ENST00000522905 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
MCPH1-207ENST00000522905 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
MCPH1-207ENST00000522905 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
MCPH1-207ENST00000522905 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
MCPH1-207ENST00000522905 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
MCPH1-207ENST00000522905 ERCC6Q03468 1493 aa16.23■□□□□ 0.19
MCPH1-207ENST00000522905 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
MCPH1-207ENST00000522905 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
MCPH1-207ENST00000522905 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
MCPH1-207ENST00000522905 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
MCPH1-207ENST00000522905 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
MCPH1-207ENST00000522905 KIF21BO75037 1637 aa16.2■□□□□ 0.18
MCPH1-207ENST00000522905 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
MCPH1-207ENST00000522905 CLIP1P30622 1438 aa16.19■□□□□ 0.18
MCPH1-207ENST00000522905 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
MCPH1-207ENST00000522905 FOXD1Q16676 465 aa16.17■□□□□ 0.18
MCPH1-207ENST00000522905 ANP32CO43423 234 aa16.16■□□□□ 0.18
MCPH1-207ENST00000522905 ITGAEP38570 1179 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms