RNA–Protein interactions for RNA: ENST00000522607.1

IGKV2-18-201, Transcript of immunoglobulin kappa variable 2-18 (pseudogene), humanhuman

BASIC

Gene IGKV2-18, Length 343 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-18-201ENST00000522607 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
IGKV2-18-201ENST00000522607 ABCC9O60706 1549 aa13.34□□□□□ -0.27
IGKV2-18-201ENST00000522607 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
IGKV2-18-201ENST00000522607 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
IGKV2-18-201ENST00000522607 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
IGKV2-18-201ENST00000522607 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
IGKV2-18-201ENST00000522607 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
IGKV2-18-201ENST00000522607 NACADO15069 1562 aa12.28□□□□□ -0.44
IGKV2-18-201ENST00000522607 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
IGKV2-18-201ENST00000522607 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
IGKV2-18-201ENST00000522607 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
IGKV2-18-201ENST00000522607 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
IGKV2-18-201ENST00000522607 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
IGKV2-18-201ENST00000522607 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
IGKV2-18-201ENST00000522607 SHROOM4Q9ULL8 1493 aa11.96□□□□□ -0.49
IGKV2-18-201ENST00000522607 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
IGKV2-18-201ENST00000522607 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
IGKV2-18-201ENST00000522607 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
IGKV2-18-201ENST00000522607 CUX2O14529 1486 aa11.73□□□□□ -0.53
IGKV2-18-201ENST00000522607 SCRIBQ14160 1630 aa11.69□□□□□ -0.54
IGKV2-18-201ENST00000522607 ERCC6Q03468 1493 aa11.62□□□□□ -0.55
IGKV2-18-201ENST00000522607 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
IGKV2-18-201ENST00000522607 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
IGKV2-18-201ENST00000522607 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
IGKV2-18-201ENST00000522607 NESP48681 1621 aa11.26□□□□□ -0.61
IGKV2-18-201ENST00000522607 HMGXB3Q12766 1538 aa11.22□□□□□ -0.61
IGKV2-18-201ENST00000522607 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
IGKV2-18-201ENST00000522607 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
IGKV2-18-201ENST00000522607 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
IGKV2-18-201ENST00000522607 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
IGKV2-18-201ENST00000522607 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
IGKV2-18-201ENST00000522607 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
IGKV2-18-201ENST00000522607 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
IGKV2-18-201ENST00000522607 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
IGKV2-18-201ENST00000522607 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
IGKV2-18-201ENST00000522607 AEBP2Q6ZN18 517 aaPredicted RBP11.09□□□□□ -0.63
IGKV2-18-201ENST00000522607 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
IGKV2-18-201ENST00000522607 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.64
IGKV2-18-201ENST00000522607 WDR62O43379 1518 aa11.01□□□□□ -0.65
IGKV2-18-201ENST00000522607 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
IGKV2-18-201ENST00000522607 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
IGKV2-18-201ENST00000522607 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
IGKV2-18-201ENST00000522607 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
IGKV2-18-201ENST00000522607 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
IGKV2-18-201ENST00000522607 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
IGKV2-18-201ENST00000522607 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
IGKV2-18-201ENST00000522607 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
IGKV2-18-201ENST00000522607 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
IGKV2-18-201ENST00000522607 FANCD2Q9BXW9 1451 aa10.86□□□□□ -0.67
IGKV2-18-201ENST00000522607 CFTRP13569 1480 aa10.83□□□□□ -0.68
IGKV2-18-201ENST00000522607 WIZO95785 1651 aa10.81□□□□□ -0.68
IGKV2-18-201ENST00000522607 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
IGKV2-18-201ENST00000522607 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
IGKV2-18-201ENST00000522607 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
IGKV2-18-201ENST00000522607 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
IGKV2-18-201ENST00000522607 ZNF608Q9ULD9 1512 aaPredicted RBP10.7□□□□□ -0.7
IGKV2-18-201ENST00000522607 FBLN2P98095 1184 aa10.69□□□□□ -0.7
IGKV2-18-201ENST00000522607 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
IGKV2-18-201ENST00000522607 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
IGKV2-18-201ENST00000522607 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
IGKV2-18-201ENST00000522607 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
IGKV2-18-201ENST00000522607 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
IGKV2-18-201ENST00000522607 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
IGKV2-18-201ENST00000522607 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
IGKV2-18-201ENST00000522607 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.72
IGKV2-18-201ENST00000522607 CHD1O14646 1710 aa10.55□□□□□ -0.72
IGKV2-18-201ENST00000522607 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
IGKV2-18-201ENST00000522607 CHMP7Q8WUX9 453 aaPredicted RBP10.54□□□□□ -0.72
IGKV2-18-201ENST00000522607 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
IGKV2-18-201ENST00000522607 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
IGKV2-18-201ENST00000522607 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
IGKV2-18-201ENST00000522607 CLASP1Q7Z460 1538 aa10.49□□□□□ -0.73
IGKV2-18-201ENST00000522607 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
IGKV2-18-201ENST00000522607 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
IGKV2-18-201ENST00000522607 SNAPC4Q5SXM2 1469 aa10.46□□□□□ -0.74
IGKV2-18-201ENST00000522607 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
IGKV2-18-201ENST00000522607 SOGA1O94964 1423 aa10.45□□□□□ -0.74
IGKV2-18-201ENST00000522607 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
IGKV2-18-201ENST00000522607 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
IGKV2-18-201ENST00000522607 SYNJ2O15056 1496 aa10.41□□□□□ -0.74
IGKV2-18-201ENST00000522607 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
IGKV2-18-201ENST00000522607 FGD5Q6ZNL6 1462 aa10.37□□□□□ -0.75
IGKV2-18-201ENST00000522607 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
IGKV2-18-201ENST00000522607 CUX1P39880 1505 aa10.33□□□□□ -0.76
IGKV2-18-201ENST00000522607 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
IGKV2-18-201ENST00000522607 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
IGKV2-18-201ENST00000522607 ABCA10Q8WWZ4 1543 aa10.28□□□□□ -0.76
IGKV2-18-201ENST00000522607 ABCC10Q5T3U5 1492 aa10.26□□□□□ -0.77
IGKV2-18-201ENST00000522607 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
IGKV2-18-201ENST00000522607 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
IGKV2-18-201ENST00000522607 NUP160Q12769 1436 aa10.24□□□□□ -0.77
IGKV2-18-201ENST00000522607 GRIN2AQ12879 1464 aa10.24□□□□□ -0.77
IGKV2-18-201ENST00000522607 KDM6BO15054 1643 aa10.24□□□□□ -0.77
IGKV2-18-201ENST00000522607 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
IGKV2-18-201ENST00000522607 CEP170Q5SW79 1584 aa10.23□□□□□ -0.77
IGKV2-18-201ENST00000522607 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
IGKV2-18-201ENST00000522607 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.78
IGKV2-18-201ENST00000522607 SHROOM2Q13796 1616 aa10.19□□□□□ -0.78
IGKV2-18-201ENST00000522607 MAPKBP1O60336 1514 aa10.18□□□□□ -0.78
IGKV2-18-201ENST00000522607 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms