RNA–Protein interactions for RNA: ENST00000521141.1

AC055854.1-203, humanhuman

TSL 5 BASIC

Gene AC055854.1, Length 1,630 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-203ENST00000521141 NISCHQ9Y2I1 1504 aa33.26■■■□□ 2.91
AC055854.1-203ENST00000521141 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
AC055854.1-203ENST00000521141 ABCC9O60706 1549 aa29.56■■■□□ 2.32
AC055854.1-203ENST00000521141 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
AC055854.1-203ENST00000521141 NACADO15069 1562 aa28.11■■■□□ 2.09
AC055854.1-203ENST00000521141 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
AC055854.1-203ENST00000521141 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
AC055854.1-203ENST00000521141 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
AC055854.1-203ENST00000521141 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
AC055854.1-203ENST00000521141 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
AC055854.1-203ENST00000521141 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
AC055854.1-203ENST00000521141 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
AC055854.1-203ENST00000521141 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
AC055854.1-203ENST00000521141 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
AC055854.1-203ENST00000521141 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
AC055854.1-203ENST00000521141 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.87
AC055854.1-203ENST00000521141 CC2D2AQ9P2K1 1620 aa26.7■■□□□ 1.86
AC055854.1-203ENST00000521141 CECR2Q9BXF3 1484 aa26.63■■□□□ 1.85
AC055854.1-203ENST00000521141 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
AC055854.1-203ENST00000521141 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
AC055854.1-203ENST00000521141 SMARCA4P51532 1647 aa25.89■■□□□ 1.73
AC055854.1-203ENST00000521141 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
AC055854.1-203ENST00000521141 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
AC055854.1-203ENST00000521141 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.72
AC055854.1-203ENST00000521141 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
AC055854.1-203ENST00000521141 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
AC055854.1-203ENST00000521141 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
AC055854.1-203ENST00000521141 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.7
AC055854.1-203ENST00000521141 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
AC055854.1-203ENST00000521141 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
AC055854.1-203ENST00000521141 NESP48681 1621 aa25.43■■□□□ 1.66
AC055854.1-203ENST00000521141 CUX2O14529 1486 aa25.42■■□□□ 1.66
AC055854.1-203ENST00000521141 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
AC055854.1-203ENST00000521141 WIZO95785 1651 aa25.31■■□□□ 1.64
AC055854.1-203ENST00000521141 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
AC055854.1-203ENST00000521141 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
AC055854.1-203ENST00000521141 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
AC055854.1-203ENST00000521141 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
AC055854.1-203ENST00000521141 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
AC055854.1-203ENST00000521141 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
AC055854.1-203ENST00000521141 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
AC055854.1-203ENST00000521141 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
AC055854.1-203ENST00000521141 CFTRP13569 1480 aa24.92■■□□□ 1.58
AC055854.1-203ENST00000521141 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
AC055854.1-203ENST00000521141 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
AC055854.1-203ENST00000521141 WDR62O43379 1518 aa24.86■■□□□ 1.57
AC055854.1-203ENST00000521141 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
AC055854.1-203ENST00000521141 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
AC055854.1-203ENST00000521141 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
AC055854.1-203ENST00000521141 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
AC055854.1-203ENST00000521141 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
AC055854.1-203ENST00000521141 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
AC055854.1-203ENST00000521141 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
AC055854.1-203ENST00000521141 DNMBPQ6XZF7 1577 aa24.35■■□□□ 1.49
AC055854.1-203ENST00000521141 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
AC055854.1-203ENST00000521141 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
AC055854.1-203ENST00000521141 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
AC055854.1-203ENST00000521141 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
AC055854.1-203ENST00000521141 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
AC055854.1-203ENST00000521141 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
AC055854.1-203ENST00000521141 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.45
AC055854.1-203ENST00000521141 SOGA1O94964 1423 aa24.1■■□□□ 1.45
AC055854.1-203ENST00000521141 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
AC055854.1-203ENST00000521141 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.44
AC055854.1-203ENST00000521141 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
AC055854.1-203ENST00000521141 CUX1P39880 1505 aa24.05■■□□□ 1.44
AC055854.1-203ENST00000521141 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
AC055854.1-203ENST00000521141 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
AC055854.1-203ENST00000521141 SYNJ1O43426 1573 aa24■■□□□ 1.43
AC055854.1-203ENST00000521141 FBLN2P98095 1184 aa23.99■■□□□ 1.43
AC055854.1-203ENST00000521141 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
AC055854.1-203ENST00000521141 CHD1O14646 1710 aa23.94■■□□□ 1.42
AC055854.1-203ENST00000521141 EEA1Q15075 1411 aa23.93■■□□□ 1.42
AC055854.1-203ENST00000521141 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
AC055854.1-203ENST00000521141 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
AC055854.1-203ENST00000521141 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
AC055854.1-203ENST00000521141 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
AC055854.1-203ENST00000521141 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
AC055854.1-203ENST00000521141 ARHGEF11O15085 1522 aa23.88■■□□□ 1.41
AC055854.1-203ENST00000521141 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
AC055854.1-203ENST00000521141 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
AC055854.1-203ENST00000521141 MAGI1Q96QZ7 1491 aaPredicted RBP23.85■■□□□ 1.41
AC055854.1-203ENST00000521141 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
AC055854.1-203ENST00000521141 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
AC055854.1-203ENST00000521141 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
AC055854.1-203ENST00000521141 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
AC055854.1-203ENST00000521141 SYNJ2O15056 1496 aa23.77■■□□□ 1.39
AC055854.1-203ENST00000521141 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
AC055854.1-203ENST00000521141 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
AC055854.1-203ENST00000521141 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
AC055854.1-203ENST00000521141 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
AC055854.1-203ENST00000521141 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
AC055854.1-203ENST00000521141 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
AC055854.1-203ENST00000521141 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
AC055854.1-203ENST00000521141 GOLGA3Q08378 1498 aa23.58■■□□□ 1.36
AC055854.1-203ENST00000521141 KIF21BO75037 1637 aa23.57■■□□□ 1.36
AC055854.1-203ENST00000521141 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
AC055854.1-203ENST00000521141 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
AC055854.1-203ENST00000521141 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
AC055854.1-203ENST00000521141 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms