RNA–Protein interactions for RNA: ENST00000520460.1

PTK2-221, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-221ENST00000520460 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
PTK2-221ENST00000520460 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
PTK2-221ENST00000520460 ABCC9O60706 1549 aa17.48■□□□□ 0.39
PTK2-221ENST00000520460 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
PTK2-221ENST00000520460 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
PTK2-221ENST00000520460 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
PTK2-221ENST00000520460 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTK2-221ENST00000520460 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
PTK2-221ENST00000520460 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
PTK2-221ENST00000520460 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
PTK2-221ENST00000520460 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
PTK2-221ENST00000520460 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
PTK2-221ENST00000520460 NACADO15069 1562 aa15.58■□□□□ 0.09
PTK2-221ENST00000520460 CUX2O14529 1486 aa15.58■□□□□ 0.08
PTK2-221ENST00000520460 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
PTK2-221ENST00000520460 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
PTK2-221ENST00000520460 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
PTK2-221ENST00000520460 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
PTK2-221ENST00000520460 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
PTK2-221ENST00000520460 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
PTK2-221ENST00000520460 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
PTK2-221ENST00000520460 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
PTK2-221ENST00000520460 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
PTK2-221ENST00000520460 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
PTK2-221ENST00000520460 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
PTK2-221ENST00000520460 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
PTK2-221ENST00000520460 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
PTK2-221ENST00000520460 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
PTK2-221ENST00000520460 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
PTK2-221ENST00000520460 NESP48681 1621 aa14.62□□□□□ -0.07
PTK2-221ENST00000520460 CYB5RLQ6IPT4 315 aa14.56□□□□□ -0.08
PTK2-221ENST00000520460 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
PTK2-221ENST00000520460 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
PTK2-221ENST00000520460 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
PTK2-221ENST00000520460 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
PTK2-221ENST00000520460 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
PTK2-221ENST00000520460 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
PTK2-221ENST00000520460 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
PTK2-221ENST00000520460 PDS5BQ9NTI5 1447 aa14.34□□□□□ -0.11
PTK2-221ENST00000520460 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
PTK2-221ENST00000520460 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
PTK2-221ENST00000520460 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
PTK2-221ENST00000520460 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
PTK2-221ENST00000520460 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
PTK2-221ENST00000520460 WDR62O43379 1518 aa14.19□□□□□ -0.14
PTK2-221ENST00000520460 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
PTK2-221ENST00000520460 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
PTK2-221ENST00000520460 SOCS7O14512 581 aa14.07□□□□□ -0.16
PTK2-221ENST00000520460 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
PTK2-221ENST00000520460 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
PTK2-221ENST00000520460 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
PTK2-221ENST00000520460 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
PTK2-221ENST00000520460 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
PTK2-221ENST00000520460 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
PTK2-221ENST00000520460 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
PTK2-221ENST00000520460 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
PTK2-221ENST00000520460 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
PTK2-221ENST00000520460 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
PTK2-221ENST00000520460 FBLN2P98095 1184 aa13.84□□□□□ -0.19
PTK2-221ENST00000520460 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
PTK2-221ENST00000520460 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
PTK2-221ENST00000520460 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
PTK2-221ENST00000520460 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
PTK2-221ENST00000520460 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
PTK2-221ENST00000520460 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
PTK2-221ENST00000520460 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
PTK2-221ENST00000520460 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
PTK2-221ENST00000520460 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
PTK2-221ENST00000520460 WIZO95785 1651 aa13.65□□□□□ -0.22
PTK2-221ENST00000520460 CHD1O14646 1710 aa13.64□□□□□ -0.23
PTK2-221ENST00000520460 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
PTK2-221ENST00000520460 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
PTK2-221ENST00000520460 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.247e-9■■■■□ 20.6
PTK2-221ENST00000520460 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
PTK2-221ENST00000520460 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
PTK2-221ENST00000520460 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
PTK2-221ENST00000520460 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
PTK2-221ENST00000520460 CFTRP13569 1480 aa13.52□□□□□ -0.25
PTK2-221ENST00000520460 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
PTK2-221ENST00000520460 KDM6BO15054 1643 aa13.46□□□□□ -0.26
PTK2-221ENST00000520460 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.26
PTK2-221ENST00000520460 SYNJ1O43426 1573 aa13.45□□□□□ -0.26
PTK2-221ENST00000520460 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
PTK2-221ENST00000520460 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
PTK2-221ENST00000520460 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
PTK2-221ENST00000520460 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
PTK2-221ENST00000520460 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
PTK2-221ENST00000520460 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
PTK2-221ENST00000520460 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTK2-221ENST00000520460 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
PTK2-221ENST00000520460 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
PTK2-221ENST00000520460 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
PTK2-221ENST00000520460 SPATA31D1Q6ZQQ2 1576 aa13.29□□□□□ -0.28
PTK2-221ENST00000520460 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
PTK2-221ENST00000520460 FOXD1Q16676 465 aa13.25□□□□□ -0.29
PTK2-221ENST00000520460 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
PTK2-221ENST00000520460 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
PTK2-221ENST00000520460 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
PTK2-221ENST00000520460 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
PTK2-221ENST00000520460 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms