RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 NISCHQ9Y2I1 1504 aa12.74□□□□□ -0.37
AC055854.1-202ENST00000519624 ABCC9O60706 1549 aa12.07□□□□□ -0.48
AC055854.1-202ENST00000519624 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
AC055854.1-202ENST00000519624 CCDC180Q9P1Z9 1646 aa11.62□□□□□ -0.55
AC055854.1-202ENST00000519624 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
AC055854.1-202ENST00000519624 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
AC055854.1-202ENST00000519624 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
AC055854.1-202ENST00000519624 NACADO15069 1562 aa11.15□□□□□ -0.62
AC055854.1-202ENST00000519624 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
AC055854.1-202ENST00000519624 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
AC055854.1-202ENST00000519624 BICRAQ9NZM4 1560 aa10.92□□□□□ -0.66
AC055854.1-202ENST00000519624 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
AC055854.1-202ENST00000519624 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
AC055854.1-202ENST00000519624 MYO15BQ96JP2 1530 aa10.86□□□□□ -0.67
AC055854.1-202ENST00000519624 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
AC055854.1-202ENST00000519624 EIF4G1Q04637 1599 aaKnown RBP10.75□□□□□ -0.69
AC055854.1-202ENST00000519624 CUX2O14529 1486 aa10.68□□□□□ -0.7
AC055854.1-202ENST00000519624 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
AC055854.1-202ENST00000519624 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
AC055854.1-202ENST00000519624 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
AC055854.1-202ENST00000519624 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
AC055854.1-202ENST00000519624 ZCCHC6Q5VYS8 1495 aaKnown RBP10.45□□□□□ -0.74
AC055854.1-202ENST00000519624 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
AC055854.1-202ENST00000519624 NESP48681 1621 aa10.2□□□□□ -0.78
AC055854.1-202ENST00000519624 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
AC055854.1-202ENST00000519624 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
AC055854.1-202ENST00000519624 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
AC055854.1-202ENST00000519624 PDS5BQ9NTI5 1447 aa10.16□□□□□ -0.78
AC055854.1-202ENST00000519624 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
AC055854.1-202ENST00000519624 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
AC055854.1-202ENST00000519624 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
AC055854.1-202ENST00000519624 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
AC055854.1-202ENST00000519624 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
AC055854.1-202ENST00000519624 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
AC055854.1-202ENST00000519624 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
AC055854.1-202ENST00000519624 KIF21AQ7Z4S6 1674 aa10.01□□□□□ -0.81
AC055854.1-202ENST00000519624 SMARCA4P51532 1647 aa10□□□□□ -0.81
AC055854.1-202ENST00000519624 WDR62O43379 1518 aa10□□□□□ -0.81
AC055854.1-202ENST00000519624 TRHP20396 242 aaPredicted RBP9.98□□□□□ -0.81
AC055854.1-202ENST00000519624 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
AC055854.1-202ENST00000519624 PEG3Q9GZU2 1588 aa9.94□□□□□ -0.82
AC055854.1-202ENST00000519624 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
AC055854.1-202ENST00000519624 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
AC055854.1-202ENST00000519624 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
AC055854.1-202ENST00000519624 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
AC055854.1-202ENST00000519624 ARHGEF11O15085 1522 aa9.89□□□□□ -0.83
AC055854.1-202ENST00000519624 CYB5RLQ6IPT4 315 aa9.89□□□□□ -0.83
AC055854.1-202ENST00000519624 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
AC055854.1-202ENST00000519624 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
AC055854.1-202ENST00000519624 ARAP1Q96P48 1450 aa9.75□□□□□ -0.85
AC055854.1-202ENST00000519624 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
AC055854.1-202ENST00000519624 CFTRP13569 1480 aa9.74□□□□□ -0.85
AC055854.1-202ENST00000519624 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
AC055854.1-202ENST00000519624 URB2Q14146 1524 aaKnown RBP9.74□□□□□ -0.85
AC055854.1-202ENST00000519624 ZNF608Q9ULD9 1512 aaPredicted RBP9.69□□□□□ -0.86
AC055854.1-202ENST00000519624 FBLN2P98095 1184 aa9.67□□□□□ -0.86
AC055854.1-202ENST00000519624 ILDR1Q86SU0 546 aaPredicted RBP9.62□□□□□ -0.87
AC055854.1-202ENST00000519624 EIF4G3O43432 1585 aaKnown RBP9.62□□□□□ -0.87
AC055854.1-202ENST00000519624 ABCC8Q09428 1581 aa9.62□□□□□ -0.87
AC055854.1-202ENST00000519624 WIZO95785 1651 aa9.6□□□□□ -0.87
AC055854.1-202ENST00000519624 CHD1O14646 1710 aa9.58□□□□□ -0.88
AC055854.1-202ENST00000519624 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
AC055854.1-202ENST00000519624 AQRO60306 1485 aaKnown RBP eCLIP9.57□□□□□ -0.88
AC055854.1-202ENST00000519624 CHMP7Q8WUX9 453 aaPredicted RBP9.55□□□□□ -0.88
AC055854.1-202ENST00000519624 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
AC055854.1-202ENST00000519624 CLASP1Q7Z460 1538 aa9.52□□□□□ -0.88
AC055854.1-202ENST00000519624 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
AC055854.1-202ENST00000519624 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
AC055854.1-202ENST00000519624 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
AC055854.1-202ENST00000519624 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
AC055854.1-202ENST00000519624 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
AC055854.1-202ENST00000519624 SNAPC4Q5SXM2 1469 aa9.47□□□□□ -0.89
AC055854.1-202ENST00000519624 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
AC055854.1-202ENST00000519624 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
AC055854.1-202ENST00000519624 TDRD9Q8NDG6 1382 aaKnown RBP9.45□□□□□ -0.9
AC055854.1-202ENST00000519624 POLA1P09884 1462 aaPredicted RBP9.45□□□□□ -0.9
AC055854.1-202ENST00000519624 SOGA1O94964 1423 aa9.44□□□□□ -0.9
AC055854.1-202ENST00000519624 SYNJ2O15056 1496 aa9.43□□□□□ -0.9
AC055854.1-202ENST00000519624 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
AC055854.1-202ENST00000519624 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
AC055854.1-202ENST00000519624 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.91
AC055854.1-202ENST00000519624 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.91
AC055854.1-202ENST00000519624 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
AC055854.1-202ENST00000519624 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
AC055854.1-202ENST00000519624 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
AC055854.1-202ENST00000519624 ABCC10Q5T3U5 1492 aa9.32□□□□□ -0.92
AC055854.1-202ENST00000519624 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
AC055854.1-202ENST00000519624 KDM6BO15054 1643 aa9.31□□□□□ -0.92
AC055854.1-202ENST00000519624 FBXO41Q8TF61 875 aa9.3□□□□□ -0.92
AC055854.1-202ENST00000519624 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
AC055854.1-202ENST00000519624 KIF13AQ9H1H9 1805 aa9.28□□□□□ -0.92
AC055854.1-202ENST00000519624 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
AC055854.1-202ENST00000519624 NUP160Q12769 1436 aa9.25□□□□□ -0.93
AC055854.1-202ENST00000519624 MAPKBP1O60336 1514 aa9.25□□□□□ -0.93
AC055854.1-202ENST00000519624 PBRM1Q86U86 1689 aa9.24□□□□□ -0.93
AC055854.1-202ENST00000519624 ADGRL1O94910 1474 aa9.23□□□□□ -0.93
AC055854.1-202ENST00000519624 DIP2BQ9P265 1576 aa9.23□□□□□ -0.93
AC055854.1-202ENST00000519624 HECW2Q9P2P5 1572 aa9.23□□□□□ -0.93
AC055854.1-202ENST00000519624 SHROOM2Q13796 1616 aa9.22□□□□□ -0.93
AC055854.1-202ENST00000519624 PRG4Q92954 1404 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms